Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 KRT8P24-201ENST00000560290 1559 ntBASIC11.03□□□□□ -0.64
SMKR1H3BMG3 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 FAM90A12P-201ENST00000519497 2375 ntBASIC11.03□□□□□ -0.64
SMKR1H3BMG3 FAM90A24P-201ENST00000520792 2369 ntBASIC11.03□□□□□ -0.64
SMKR1H3BMG3 KRT8P22-201ENST00000562317 1415 ntBASIC11.03□□□□□ -0.64
SMKR1H3BMG3 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 AL365181.3-201ENST00000605886 3222 ntBASIC11.03□□□□□ -0.64
SMKR1H3BMG3 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 PFN2-205ENST00000461868 613 ntTSL 2 BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 SMN2-210ENST00000511812 867 ntTSL 2 BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 MAX-210ENST00000555419 765 ntTSL 5 BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 AL135744.1-201ENST00000565098 629 ntBASIC11.03□□□□□ -0.64
SMKR1H3BMG3 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMKR1H3BMG3 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
SMKR1H3BMG3 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.64
SMKR1H3BMG3 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
SMKR1H3BMG3 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
SMKR1H3BMG3 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
SMKR1H3BMG3 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
SMKR1H3BMG3 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
SMKR1H3BMG3 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms