Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
MBD3L3A6NE82 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.06□□□□□ -0.32
MBD3L3A6NE82 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
MBD3L3A6NE82 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
MBD3L3A6NE82 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
MBD3L3A6NE82 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
MBD3L3A6NE82 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.05□□□□□ -0.32
MBD3L3A6NE82 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
MBD3L3A6NE82 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
MBD3L3A6NE82 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
MBD3L3A6NE82 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
MBD3L3A6NE82 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
MBD3L3A6NE82 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.05□□□□□ -0.32
MBD3L3A6NE82 AC013726.1-201ENST00000563747 2285 ntBASIC13.05□□□□□ -0.32
MBD3L3A6NE82 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
MBD3L3A6NE82 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
MBD3L3A6NE82 AC008741.2-201ENST00000612792 3115 ntBASIC13.05□□□□□ -0.32
MBD3L3A6NE82 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
MBD3L3A6NE82 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.05□□□□□ -0.32
MBD3L3A6NE82 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
MBD3L3A6NE82 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
MBD3L3A6NE82 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
MBD3L3A6NE82 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.05□□□□□ -0.32
MBD3L3A6NE82 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
MBD3L3A6NE82 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
MBD3L3A6NE82 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.05□□□□□ -0.32
MBD3L3A6NE82 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC13.05□□□□□ -0.32
MBD3L3A6NE82 AC092506.1-202ENST00000401022 528 ntBASIC13.05□□□□□ -0.32
MBD3L3A6NE82 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.05□□□□□ -0.32
MBD3L3A6NE82 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC13.05□□□□□ -0.32
MBD3L3A6NE82 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC13.05□□□□□ -0.32
MBD3L3A6NE82 AC007274.2-201ENST00000421675 662 ntBASIC13.05□□□□□ -0.32
MBD3L3A6NE82 ISCA2P1-201ENST00000425548 448 ntBASIC13.05□□□□□ -0.32
MBD3L3A6NE82 AL353637.1-201ENST00000451571 732 ntBASIC13.05□□□□□ -0.32
MBD3L3A6NE82 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.05□□□□□ -0.32
MBD3L3A6NE82 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.05□□□□□ -0.32
MBD3L3A6NE82 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC13.05□□□□□ -0.32
MBD3L3A6NE82 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC13.05□□□□□ -0.32
MBD3L3A6NE82 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC13.05□□□□□ -0.32
MBD3L3A6NE82 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
MBD3L3A6NE82 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.05□□□□□ -0.32
MBD3L3A6NE82 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC13.05□□□□□ -0.32
MBD3L3A6NE82 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
MBD3L3A6NE82 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
MBD3L3A6NE82 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
MBD3L3A6NE82 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
MBD3L3A6NE82 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.05□□□□□ -0.32
MBD3L3A6NE82 AC006486.2-201ENST00000624246 2199 ntBASIC13.05□□□□□ -0.32
MBD3L3A6NE82 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
MBD3L3A6NE82 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.05□□□□□ -0.32
MBD3L3A6NE82 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC13.05□□□□□ -0.32
MBD3L3A6NE82 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
MBD3L3A6NE82 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
MBD3L3A6NE82 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
MBD3L3A6NE82 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.05□□□□□ -0.32
MBD3L3A6NE82 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
MBD3L3A6NE82 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
MBD3L3A6NE82 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
MBD3L3A6NE82 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
MBD3L3A6NE82 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
MBD3L3A6NE82 AC009093.10-201ENST00000641956 1442 ntBASIC13.05□□□□□ -0.32
MBD3L3A6NE82 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
MBD3L3A6NE82 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
MBD3L3A6NE82 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
MBD3L3A6NE82 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
MBD3L3A6NE82 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
MBD3L3A6NE82 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
MBD3L3A6NE82 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
MBD3L3A6NE82 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.04□□□□□ -0.32
MBD3L3A6NE82 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.04□□□□□ -0.32
MBD3L3A6NE82 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
MBD3L3A6NE82 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.04□□□□□ -0.32
MBD3L3A6NE82 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
MBD3L3A6NE82 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC13.04□□□□□ -0.32
MBD3L3A6NE82 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
MBD3L3A6NE82 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
MBD3L3A6NE82 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
MBD3L3A6NE82 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.04□□□□□ -0.32
MBD3L3A6NE82 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
MBD3L3A6NE82 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
MBD3L3A6NE82 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
MBD3L3A6NE82 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.04□□□□□ -0.32
MBD3L3A6NE82 CMC1-204ENST00000423894 549 ntTSL 2 BASIC13.04□□□□□ -0.32
MBD3L3A6NE82 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC13.04□□□□□ -0.32
MBD3L3A6NE82 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC13.04□□□□□ -0.32
MBD3L3A6NE82 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
MBD3L3A6NE82 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC13.04□□□□□ -0.32
MBD3L3A6NE82 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC13.04□□□□□ -0.32
MBD3L3A6NE82 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC13.04□□□□□ -0.32
MBD3L3A6NE82 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC13.04□□□□□ -0.32
MBD3L3A6NE82 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.04□□□□□ -0.32
MBD3L3A6NE82 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.04□□□□□ -0.32
MBD3L3A6NE82 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC13.04□□□□□ -0.32
MBD3L3A6NE82 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC13.04□□□□□ -0.32
MBD3L3A6NE82 FGFR3P5-201ENST00000564496 886 ntBASIC13.04□□□□□ -0.32
MBD3L3A6NE82 COG4-212ENST00000564653 590 ntTSL 5 BASIC13.04□□□□□ -0.32
MBD3L3A6NE82 HCG18-245ENST00000602550 559 ntTSL 4 BASIC13.04□□□□□ -0.32
MBD3L3A6NE82 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
MBD3L3A6NE82 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
MBD3L3A6NE82 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms