Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPDC1A2A3K4 FAM86MP-201ENST00000340703 885 ntBASIC17.66■□□□□ 0.42
PTPDC1A2A3K4 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PTPDC1A2A3K4 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PTPDC1A2A3K4 AL139094.1-201ENST00000405549 1188 ntBASIC17.66■□□□□ 0.42
PTPDC1A2A3K4 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC17.66■□□□□ 0.42
PTPDC1A2A3K4 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.66■□□□□ 0.42
PTPDC1A2A3K4 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PTPDC1A2A3K4 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.66■□□□□ 0.42
PTPDC1A2A3K4 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.66■□□□□ 0.42
PTPDC1A2A3K4 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PTPDC1A2A3K4 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.66■□□□□ 0.42
PTPDC1A2A3K4 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.66■□□□□ 0.42
PTPDC1A2A3K4 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.66■□□□□ 0.42
PTPDC1A2A3K4 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.66■□□□□ 0.42
PTPDC1A2A3K4 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.66■□□□□ 0.42
PTPDC1A2A3K4 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPDC1A2A3K4 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPDC1A2A3K4 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPDC1A2A3K4 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPDC1A2A3K4 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC17.66■□□□□ 0.42
PTPDC1A2A3K4 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPDC1A2A3K4 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPDC1A2A3K4 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPDC1A2A3K4 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPDC1A2A3K4 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.66■□□□□ 0.42
PTPDC1A2A3K4 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPDC1A2A3K4 AC097359.2-201ENST00000604992 2389 ntBASIC17.66■□□□□ 0.42
PTPDC1A2A3K4 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPDC1A2A3K4 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPDC1A2A3K4 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PTPDC1A2A3K4 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PTPDC1A2A3K4 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
PTPDC1A2A3K4 AC005089.1-201ENST00000619486 2241 ntBASIC17.66■□□□□ 0.42
PTPDC1A2A3K4 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPDC1A2A3K4 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTPDC1A2A3K4 KRT8P14-201ENST00000414254 1442 ntBASIC17.65■□□□□ 0.42
PTPDC1A2A3K4 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
PTPDC1A2A3K4 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPDC1A2A3K4 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.65■□□□□ 0.42
PTPDC1A2A3K4 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTPDC1A2A3K4 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTPDC1A2A3K4 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
PTPDC1A2A3K4 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC17.65■□□□□ 0.42
PTPDC1A2A3K4 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTPDC1A2A3K4 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPDC1A2A3K4 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC17.65■□□□□ 0.42
PTPDC1A2A3K4 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPDC1A2A3K4 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTPDC1A2A3K4 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPDC1A2A3K4 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPDC1A2A3K4 NUS1P3-201ENST00000423502 862 ntBASIC17.65■□□□□ 0.42
PTPDC1A2A3K4 AC026954.1-201ENST00000429771 1293 ntBASIC17.65■□□□□ 0.42
PTPDC1A2A3K4 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.65■□□□□ 0.42
PTPDC1A2A3K4 RN7SL219P-201ENST00000582872 296 ntBASIC17.65■□□□□ 0.42
PTPDC1A2A3K4 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.65■□□□□ 0.42
PTPDC1A2A3K4 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTPDC1A2A3K4 TECR-220ENST00000600083 1204 ntTSL 2 BASIC17.65■□□□□ 0.42
PTPDC1A2A3K4 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.65■□□□□ 0.42
PTPDC1A2A3K4 AC145423.3-201ENST00000615987 467 ntBASIC17.65■□□□□ 0.42
PTPDC1A2A3K4 RHOXF1P1-202ENST00000635473 501 ntBASIC17.65■□□□□ 0.42
PTPDC1A2A3K4 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPDC1A2A3K4 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC17.65■□□□□ 0.42
PTPDC1A2A3K4 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPDC1A2A3K4 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPDC1A2A3K4 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPDC1A2A3K4 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.65■□□□□ 0.42
PTPDC1A2A3K4 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
PTPDC1A2A3K4 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPDC1A2A3K4 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
PTPDC1A2A3K4 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.65■□□□□ 0.42
PTPDC1A2A3K4 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTPDC1A2A3K4 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
PTPDC1A2A3K4 AC113367.3-201ENST00000508316 1912 ntBASIC17.64■□□□□ 0.42
PTPDC1A2A3K4 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
PTPDC1A2A3K4 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.42
PTPDC1A2A3K4 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPDC1A2A3K4 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.64■□□□□ 0.41
PTPDC1A2A3K4 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPDC1A2A3K4 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTPDC1A2A3K4 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTPDC1A2A3K4 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC17.64■□□□□ 0.41
PTPDC1A2A3K4 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
PTPDC1A2A3K4 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC17.64■□□□□ 0.41
PTPDC1A2A3K4 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPDC1A2A3K4 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPDC1A2A3K4 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTPDC1A2A3K4 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPDC1A2A3K4 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PTPDC1A2A3K4 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPDC1A2A3K4 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPDC1A2A3K4 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
PTPDC1A2A3K4 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
PTPDC1A2A3K4 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTPDC1A2A3K4 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPDC1A2A3K4 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.64■□□□□ 0.41
PTPDC1A2A3K4 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PTPDC1A2A3K4 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
PTPDC1A2A3K4 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.64■□□□□ 0.41
PTPDC1A2A3K4 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms