Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLIC4Q9Y696 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC17.13■□□□□ 0.33
CLIC4Q9Y696 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLIC4Q9Y696 PAM16-204ENST00000571941 674 ntTSL 3 BASIC17.13■□□□□ 0.33
CLIC4Q9Y696 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CLIC4Q9Y696 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.13■□□□□ 0.33
CLIC4Q9Y696 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CLIC4Q9Y696 MVK-214ENST00000629016 1591 ntTSL 5 BASIC17.13■□□□□ 0.33
CLIC4Q9Y696 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLIC4Q9Y696 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLIC4Q9Y696 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLIC4Q9Y696 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CLIC4Q9Y696 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLIC4Q9Y696 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLIC4Q9Y696 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLIC4Q9Y696 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLIC4Q9Y696 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLIC4Q9Y696 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLIC4Q9Y696 SALL4P5-201ENST00000419001 1760 ntBASIC17.12■□□□□ 0.33
CLIC4Q9Y696 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLIC4Q9Y696 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLIC4Q9Y696 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLIC4Q9Y696 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLIC4Q9Y696 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLIC4Q9Y696 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC17.12■□□□□ 0.33
CLIC4Q9Y696 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CLIC4Q9Y696 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLIC4Q9Y696 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLIC4Q9Y696 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLIC4Q9Y696 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
CLIC4Q9Y696 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLIC4Q9Y696 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLIC4Q9Y696 ACTBP8-201ENST00000403258 1108 ntBASIC17.12■□□□□ 0.33
CLIC4Q9Y696 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.12■□□□□ 0.33
CLIC4Q9Y696 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.12■□□□□ 0.33
CLIC4Q9Y696 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.12■□□□□ 0.33
CLIC4Q9Y696 AC093433.1-201ENST00000458048 571 ntBASIC17.12■□□□□ 0.33
CLIC4Q9Y696 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLIC4Q9Y696 SPCS2P1-201ENST00000561636 679 ntBASIC17.12■□□□□ 0.33
CLIC4Q9Y696 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.12■□□□□ 0.33
CLIC4Q9Y696 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.12■□□□□ 0.33
CLIC4Q9Y696 AL096865.1-201ENST00000606796 927 ntBASIC17.12■□□□□ 0.33
CLIC4Q9Y696 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.12■□□□□ 0.33
CLIC4Q9Y696 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.12■□□□□ 0.33
CLIC4Q9Y696 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC17.12■□□□□ 0.33
CLIC4Q9Y696 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLIC4Q9Y696 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLIC4Q9Y696 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC17.12■□□□□ 0.33
CLIC4Q9Y696 AL161772.1-201ENST00000610494 4412 ntBASIC17.12■□□□□ 0.33
CLIC4Q9Y696 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CLIC4Q9Y696 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLIC4Q9Y696 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC17.12■□□□□ 0.33
CLIC4Q9Y696 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLIC4Q9Y696 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CLIC4Q9Y696 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CLIC4Q9Y696 AC012617.1-204ENST00000586340 2305 ntBASIC17.12■□□□□ 0.33
CLIC4Q9Y696 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLIC4Q9Y696 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLIC4Q9Y696 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CLIC4Q9Y696 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLIC4Q9Y696 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CLIC4Q9Y696 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLIC4Q9Y696 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLIC4Q9Y696 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLIC4Q9Y696 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLIC4Q9Y696 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CLIC4Q9Y696 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC17.11■□□□□ 0.33
CLIC4Q9Y696 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC17.11■□□□□ 0.33
CLIC4Q9Y696 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC17.11■□□□□ 0.33
CLIC4Q9Y696 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLIC4Q9Y696 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLIC4Q9Y696 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLIC4Q9Y696 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CLIC4Q9Y696 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLIC4Q9Y696 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.11■□□□□ 0.33
CLIC4Q9Y696 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
CLIC4Q9Y696 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CLIC4Q9Y696 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CLIC4Q9Y696 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.11■□□□□ 0.33
CLIC4Q9Y696 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.11■□□□□ 0.33
CLIC4Q9Y696 FO681548.1-201ENST00000455617 1132 ntBASIC17.11■□□□□ 0.33
CLIC4Q9Y696 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.11■□□□□ 0.33
CLIC4Q9Y696 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.11■□□□□ 0.33
CLIC4Q9Y696 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.11■□□□□ 0.33
CLIC4Q9Y696 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.11■□□□□ 0.33
CLIC4Q9Y696 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.11■□□□□ 0.33
CLIC4Q9Y696 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CLIC4Q9Y696 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLIC4Q9Y696 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLIC4Q9Y696 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC17.11■□□□□ 0.33
CLIC4Q9Y696 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CLIC4Q9Y696 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLIC4Q9Y696 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CLIC4Q9Y696 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.11■□□□□ 0.33
CLIC4Q9Y696 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
CLIC4Q9Y696 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLIC4Q9Y696 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC17.11■□□□□ 0.33
CLIC4Q9Y696 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLIC4Q9Y696 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLIC4Q9Y696 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms