Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CDC42BPBQ9Y5S2 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC21.93■■□□□ 1.1
CDC42BPBQ9Y5S2 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDC42BPBQ9Y5S2 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC21.93■■□□□ 1.1
CDC42BPBQ9Y5S2 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDC42BPBQ9Y5S2 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDC42BPBQ9Y5S2 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDC42BPBQ9Y5S2 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDC42BPBQ9Y5S2 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC21.93■■□□□ 1.1
CDC42BPBQ9Y5S2 KRT18P46-201ENST00000435568 1279 ntBASIC21.93■■□□□ 1.1
CDC42BPBQ9Y5S2 AL135901.1-201ENST00000451812 333 ntBASIC21.93■■□□□ 1.1
CDC42BPBQ9Y5S2 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC21.93■■□□□ 1.1
CDC42BPBQ9Y5S2 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CDC42BPBQ9Y5S2 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
CDC42BPBQ9Y5S2 NDUFB10P1-201ENST00000567319 521 ntBASIC21.93■■□□□ 1.1
CDC42BPBQ9Y5S2 EIF5AP2-201ENST00000585668 1047 ntBASIC21.93■■□□□ 1.1
CDC42BPBQ9Y5S2 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC21.93■■□□□ 1.1
CDC42BPBQ9Y5S2 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC21.93■■□□□ 1.1
CDC42BPBQ9Y5S2 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDC42BPBQ9Y5S2 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDC42BPBQ9Y5S2 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC21.93■■□□□ 1.1
CDC42BPBQ9Y5S2 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDC42BPBQ9Y5S2 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC21.93■■□□□ 1.1
CDC42BPBQ9Y5S2 AC011270.2-201ENST00000624293 2550 ntBASIC21.93■■□□□ 1.1
CDC42BPBQ9Y5S2 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDC42BPBQ9Y5S2 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC21.93■■□□□ 1.1
CDC42BPBQ9Y5S2 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDC42BPBQ9Y5S2 AC019109.1-201ENST00000401725 1874 ntBASIC21.92■■□□□ 1.1
CDC42BPBQ9Y5S2 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CDC42BPBQ9Y5S2 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC21.92■■□□□ 1.1
CDC42BPBQ9Y5S2 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC21.92■■□□□ 1.1
CDC42BPBQ9Y5S2 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC21.92■■□□□ 1.1
CDC42BPBQ9Y5S2 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC21.92■■□□□ 1.1
CDC42BPBQ9Y5S2 RPS5-204ENST00000598098 536 ntTSL 2 BASIC21.92■■□□□ 1.1
CDC42BPBQ9Y5S2 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDC42BPBQ9Y5S2 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC21.92■■□□□ 1.1
CDC42BPBQ9Y5S2 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC21.92■■□□□ 1.1
CDC42BPBQ9Y5S2 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
CDC42BPBQ9Y5S2 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDC42BPBQ9Y5S2 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDC42BPBQ9Y5S2 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC21.92■■□□□ 1.1
CDC42BPBQ9Y5S2 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDC42BPBQ9Y5S2 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC21.92■■□□□ 1.1
CDC42BPBQ9Y5S2 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDC42BPBQ9Y5S2 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC21.92■■□□□ 1.1
CDC42BPBQ9Y5S2 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC21.92■■□□□ 1.1
CDC42BPBQ9Y5S2 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDC42BPBQ9Y5S2 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDC42BPBQ9Y5S2 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
CDC42BPBQ9Y5S2 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDC42BPBQ9Y5S2 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
CDC42BPBQ9Y5S2 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC21.92■■□□□ 1.1
CDC42BPBQ9Y5S2 AL161932.2-201ENST00000435436 679 ntBASIC21.92■■□□□ 1.1
CDC42BPBQ9Y5S2 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
CDC42BPBQ9Y5S2 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC21.92■■□□□ 1.1
CDC42BPBQ9Y5S2 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC21.92■■□□□ 1.1
CDC42BPBQ9Y5S2 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC21.92■■□□□ 1.1
CDC42BPBQ9Y5S2 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC21.92■■□□□ 1.1
CDC42BPBQ9Y5S2 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC21.92■■□□□ 1.1
CDC42BPBQ9Y5S2 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDC42BPBQ9Y5S2 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDC42BPBQ9Y5S2 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDC42BPBQ9Y5S2 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC21.91■■□□□ 1.1
CDC42BPBQ9Y5S2 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CDC42BPBQ9Y5S2 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDC42BPBQ9Y5S2 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
CDC42BPBQ9Y5S2 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CDC42BPBQ9Y5S2 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC21.91■■□□□ 1.1
CDC42BPBQ9Y5S2 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
CDC42BPBQ9Y5S2 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC21.91■■□□□ 1.1
CDC42BPBQ9Y5S2 AC140658.4-201ENST00000561990 352 ntBASIC21.91■■□□□ 1.1
CDC42BPBQ9Y5S2 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CDC42BPBQ9Y5S2 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
CDC42BPBQ9Y5S2 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC21.91■■□□□ 1.1
CDC42BPBQ9Y5S2 ETV2-207ENST00000619399 994 ntTSL 5 BASIC21.91■■□□□ 1.1
CDC42BPBQ9Y5S2 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC21.91■■□□□ 1.1
CDC42BPBQ9Y5S2 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDC42BPBQ9Y5S2 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDC42BPBQ9Y5S2 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDC42BPBQ9Y5S2 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC21.9■■□□□ 1.1
CDC42BPBQ9Y5S2 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDC42BPBQ9Y5S2 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDC42BPBQ9Y5S2 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDC42BPBQ9Y5S2 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDC42BPBQ9Y5S2 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC21.9■■□□□ 1.1
CDC42BPBQ9Y5S2 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
CDC42BPBQ9Y5S2 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDC42BPBQ9Y5S2 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDC42BPBQ9Y5S2 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC21.9■■□□□ 1.1
CDC42BPBQ9Y5S2 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDC42BPBQ9Y5S2 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDC42BPBQ9Y5S2 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC21.9■■□□□ 1.1
CDC42BPBQ9Y5S2 AREG-202ENST00000502307 956 ntTSL 5 BASIC21.9■■□□□ 1.1
CDC42BPBQ9Y5S2 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDC42BPBQ9Y5S2 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC21.9■■□□□ 1.1
CDC42BPBQ9Y5S2 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC21.9■■□□□ 1.1
CDC42BPBQ9Y5S2 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC21.9■■□□□ 1.1
CDC42BPBQ9Y5S2 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDC42BPBQ9Y5S2 CTBP2P8-201ENST00000422584 1330 ntBASIC21.9■■□□□ 1.1
CDC42BPBQ9Y5S2 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms