Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRFN1Q9P244 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRFN1Q9P244 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRFN1Q9P244 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
LRFN1Q9P244 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC13.81□□□□□ -0.2
LRFN1Q9P244 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRFN1Q9P244 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRFN1Q9P244 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.81□□□□□ -0.2
LRFN1Q9P244 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRFN1Q9P244 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRFN1Q9P244 AP003171.2-201ENST00000528208 925 ntBASIC13.81□□□□□ -0.2
LRFN1Q9P244 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
LRFN1Q9P244 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC13.81□□□□□ -0.2
LRFN1Q9P244 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.81□□□□□ -0.2
LRFN1Q9P244 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.81□□□□□ -0.2
LRFN1Q9P244 NAT9-222ENST00000583476 583 ntTSL 3 BASIC13.81□□□□□ -0.2
LRFN1Q9P244 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.81□□□□□ -0.2
LRFN1Q9P244 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRFN1Q9P244 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.81□□□□□ -0.2
LRFN1Q9P244 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRFN1Q9P244 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRFN1Q9P244 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRFN1Q9P244 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRFN1Q9P244 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRFN1Q9P244 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRFN1Q9P244 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRFN1Q9P244 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRFN1Q9P244 C8orf49-201ENST00000525043 1968 ntBASIC13.81□□□□□ -0.2
LRFN1Q9P244 AC112693.3-201ENST00000624819 1983 ntBASIC13.81□□□□□ -0.2
LRFN1Q9P244 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRFN1Q9P244 GRN-222ENST00000639447 1314 ntTSL 2 BASIC13.81□□□□□ -0.2
LRFN1Q9P244 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRFN1Q9P244 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
LRFN1Q9P244 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRFN1Q9P244 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.81□□□□□ -0.2
LRFN1Q9P244 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRFN1Q9P244 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRFN1Q9P244 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRFN1Q9P244 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRFN1Q9P244 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRFN1Q9P244 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRFN1Q9P244 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRFN1Q9P244 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
LRFN1Q9P244 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
LRFN1Q9P244 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRFN1Q9P244 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.81□□□□□ -0.2
LRFN1Q9P244 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRFN1Q9P244 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LRFN1Q9P244 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
LRFN1Q9P244 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRFN1Q9P244 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRFN1Q9P244 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRFN1Q9P244 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRFN1Q9P244 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRFN1Q9P244 AC023024.2-201ENST00000623561 1993 ntBASIC13.8□□□□□ -0.2
LRFN1Q9P244 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRFN1Q9P244 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.8□□□□□ -0.2
LRFN1Q9P244 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRFN1Q9P244 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.8□□□□□ -0.2
LRFN1Q9P244 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRFN1Q9P244 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.8□□□□□ -0.2
LRFN1Q9P244 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRFN1Q9P244 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRFN1Q9P244 AC138969.2-201ENST00000532739 9932 ntBASIC13.8□□□□□ -0.2
LRFN1Q9P244 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LRFN1Q9P244 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRFN1Q9P244 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRFN1Q9P244 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRFN1Q9P244 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRFN1Q9P244 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRFN1Q9P244 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRFN1Q9P244 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRFN1Q9P244 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRFN1Q9P244 AL136309.1-201ENST00000403917 691 ntBASIC13.8□□□□□ -0.2
LRFN1Q9P244 KRTAP10-13P-201ENST00000412914 571 ntBASIC13.8□□□□□ -0.2
LRFN1Q9P244 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRFN1Q9P244 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.8□□□□□ -0.2
LRFN1Q9P244 PTPA-218ENST00000435132 618 ntTSL 2 BASIC13.8□□□□□ -0.2
LRFN1Q9P244 HSPB1P2-201ENST00000448722 546 ntBASIC13.8□□□□□ -0.2
LRFN1Q9P244 OARD1-212ENST00000482515 832 ntTSL 2 BASIC13.8□□□□□ -0.2
LRFN1Q9P244 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC13.8□□□□□ -0.2
LRFN1Q9P244 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRFN1Q9P244 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRFN1Q9P244 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRFN1Q9P244 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRFN1Q9P244 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRFN1Q9P244 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRFN1Q9P244 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRFN1Q9P244 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.8□□□□□ -0.2
LRFN1Q9P244 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRFN1Q9P244 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.8□□□□□ -0.2
LRFN1Q9P244 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.8□□□□□ -0.2
LRFN1Q9P244 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LRFN1Q9P244 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRFN1Q9P244 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRFN1Q9P244 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
LRFN1Q9P244 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.8□□□□□ -0.2
LRFN1Q9P244 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRFN1Q9P244 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.8□□□□□ -0.2
LRFN1Q9P244 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms