Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
VAPAQ9P0L0 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VAPAQ9P0L0 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VAPAQ9P0L0 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
VAPAQ9P0L0 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
VAPAQ9P0L0 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
VAPAQ9P0L0 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
VAPAQ9P0L0 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VAPAQ9P0L0 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
VAPAQ9P0L0 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.22□□□□□ -0.13
VAPAQ9P0L0 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VAPAQ9P0L0 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VAPAQ9P0L0 TREML5P-201ENST00000421694 576 ntBASIC14.22□□□□□ -0.13
VAPAQ9P0L0 TSSK5P-201ENST00000423978 907 ntBASIC14.22□□□□□ -0.13
VAPAQ9P0L0 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.22□□□□□ -0.13
VAPAQ9P0L0 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.22□□□□□ -0.13
VAPAQ9P0L0 DNAJB3-202ENST00000449667 1266 ntBASIC14.22□□□□□ -0.13
VAPAQ9P0L0 AC009477.1-201ENST00000452936 217 ntBASIC14.22□□□□□ -0.13
VAPAQ9P0L0 AC004967.1-201ENST00000453589 447 ntBASIC14.22□□□□□ -0.13
VAPAQ9P0L0 AC092865.5-201ENST00000545435 363 ntBASIC14.22□□□□□ -0.13
VAPAQ9P0L0 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.22□□□□□ -0.13
VAPAQ9P0L0 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
VAPAQ9P0L0 AC009407.1-201ENST00000568958 598 ntBASIC14.22□□□□□ -0.13
VAPAQ9P0L0 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.22□□□□□ -0.13
VAPAQ9P0L0 AL158211.3-201ENST00000607385 239 ntBASIC14.22□□□□□ -0.13
VAPAQ9P0L0 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
VAPAQ9P0L0 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VAPAQ9P0L0 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
VAPAQ9P0L0 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VAPAQ9P0L0 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VAPAQ9P0L0 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VAPAQ9P0L0 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
VAPAQ9P0L0 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VAPAQ9P0L0 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
VAPAQ9P0L0 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VAPAQ9P0L0 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
VAPAQ9P0L0 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.22□□□□□ -0.13
VAPAQ9P0L0 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VAPAQ9P0L0 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VAPAQ9P0L0 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
VAPAQ9P0L0 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
VAPAQ9P0L0 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VAPAQ9P0L0 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VAPAQ9P0L0 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VAPAQ9P0L0 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
VAPAQ9P0L0 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
VAPAQ9P0L0 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.21□□□□□ -0.13
VAPAQ9P0L0 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.21□□□□□ -0.13
VAPAQ9P0L0 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.21□□□□□ -0.13
VAPAQ9P0L0 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.21□□□□□ -0.13
VAPAQ9P0L0 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VAPAQ9P0L0 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.21□□□□□ -0.13
VAPAQ9P0L0 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
VAPAQ9P0L0 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
VAPAQ9P0L0 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
VAPAQ9P0L0 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VAPAQ9P0L0 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VAPAQ9P0L0 BTBD7P1-201ENST00000447253 1453 ntBASIC14.21□□□□□ -0.13
VAPAQ9P0L0 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VAPAQ9P0L0 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
VAPAQ9P0L0 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.21□□□□□ -0.13
VAPAQ9P0L0 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
VAPAQ9P0L0 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VAPAQ9P0L0 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VAPAQ9P0L0 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VAPAQ9P0L0 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.21□□□□□ -0.13
VAPAQ9P0L0 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.21□□□□□ -0.13
VAPAQ9P0L0 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.21□□□□□ -0.13
VAPAQ9P0L0 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.21□□□□□ -0.13
VAPAQ9P0L0 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.21□□□□□ -0.13
VAPAQ9P0L0 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.21□□□□□ -0.13
VAPAQ9P0L0 AC025678.2-201ENST00000562061 970 ntBASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms