Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 BASP1P1-201ENST00000430708 665 ntBASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 AC022447.6-201ENST00000515522 438 ntBASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 BRI3BPP1-201ENST00000594224 787 ntBASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 AC106028.4-201ENST00000614509 607 ntBASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 PRSS30P-206ENST00000641773 873 ntBASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRTM1Q9HBL6 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
LRTM1Q9HBL6 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
LRTM1Q9HBL6 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LRTM1Q9HBL6 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRTM1Q9HBL6 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
LRTM1Q9HBL6 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
LRTM1Q9HBL6 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRTM1Q9HBL6 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
LRTM1Q9HBL6 INTS4P2-202ENST00000614726 2019 ntBASIC14.48□□□□□ -0.09
LRTM1Q9HBL6 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRTM1Q9HBL6 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
LRTM1Q9HBL6 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
LRTM1Q9HBL6 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRTM1Q9HBL6 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.48□□□□□ -0.09
LRTM1Q9HBL6 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRTM1Q9HBL6 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.48□□□□□ -0.09
LRTM1Q9HBL6 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
LRTM1Q9HBL6 MIR770-201ENST00000390219 98 ntBASIC14.48□□□□□ -0.09
LRTM1Q9HBL6 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRTM1Q9HBL6 AL139094.1-201ENST00000405549 1188 ntBASIC14.48□□□□□ -0.09
LRTM1Q9HBL6 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRTM1Q9HBL6 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.48□□□□□ -0.09
LRTM1Q9HBL6 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.48□□□□□ -0.09
LRTM1Q9HBL6 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.48□□□□□ -0.09
LRTM1Q9HBL6 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.48□□□□□ -0.09
LRTM1Q9HBL6 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.48□□□□□ -0.09
LRTM1Q9HBL6 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.48□□□□□ -0.09
LRTM1Q9HBL6 AC007431.3-201ENST00000623221 587 ntBASIC14.48□□□□□ -0.09
LRTM1Q9HBL6 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
LRTM1Q9HBL6 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.48□□□□□ -0.09
LRTM1Q9HBL6 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
LRTM1Q9HBL6 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRTM1Q9HBL6 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRTM1Q9HBL6 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
LRTM1Q9HBL6 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRTM1Q9HBL6 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRTM1Q9HBL6 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.48□□□□□ -0.09
LRTM1Q9HBL6 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRTM1Q9HBL6 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.48□□□□□ -0.09
LRTM1Q9HBL6 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRTM1Q9HBL6 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRTM1Q9HBL6 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRTM1Q9HBL6 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.48□□□□□ -0.09
LRTM1Q9HBL6 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LRTM1Q9HBL6 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRTM1Q9HBL6 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LRTM1Q9HBL6 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRTM1Q9HBL6 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.47□□□□□ -0.09
LRTM1Q9HBL6 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRTM1Q9HBL6 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms