Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.96■□□□□ 0.47
RTFDC1Q9BY42 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC17.96■□□□□ 0.47
RTFDC1Q9BY42 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTFDC1Q9BY42 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTFDC1Q9BY42 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTFDC1Q9BY42 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTFDC1Q9BY42 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTFDC1Q9BY42 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTFDC1Q9BY42 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.46
RTFDC1Q9BY42 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RTFDC1Q9BY42 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.95■□□□□ 0.46
RTFDC1Q9BY42 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTFDC1Q9BY42 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTFDC1Q9BY42 PAUPAR-201ENST00000630360 2965 ntBASIC17.95■□□□□ 0.46
RTFDC1Q9BY42 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.95■□□□□ 0.46
RTFDC1Q9BY42 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
RTFDC1Q9BY42 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC17.95■□□□□ 0.46
RTFDC1Q9BY42 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RTFDC1Q9BY42 RNA5SP359-201ENST00000364838 113 ntBASIC17.95■□□□□ 0.46
RTFDC1Q9BY42 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC17.95■□□□□ 0.46
RTFDC1Q9BY42 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RTFDC1Q9BY42 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RTFDC1Q9BY42 LYPLA2P1-203ENST00000447689 696 ntBASIC17.95■□□□□ 0.46
RTFDC1Q9BY42 PIN4P1-201ENST00000451079 396 ntBASIC17.95■□□□□ 0.46
RTFDC1Q9BY42 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC17.95■□□□□ 0.46
RTFDC1Q9BY42 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC17.95■□□□□ 0.46
RTFDC1Q9BY42 RN7SL81P-201ENST00000493781 261 ntBASIC17.95■□□□□ 0.46
RTFDC1Q9BY42 PTK2-225ENST00000520892 571 ntTSL 4 BASIC17.95■□□□□ 0.46
RTFDC1Q9BY42 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC17.95■□□□□ 0.46
RTFDC1Q9BY42 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RTFDC1Q9BY42 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC17.95■□□□□ 0.46
RTFDC1Q9BY42 AL161773.1-201ENST00000624845 863 ntBASIC17.95■□□□□ 0.46
RTFDC1Q9BY42 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTFDC1Q9BY42 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
RTFDC1Q9BY42 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RTFDC1Q9BY42 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTFDC1Q9BY42 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTFDC1Q9BY42 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RTFDC1Q9BY42 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTFDC1Q9BY42 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC17.95■□□□□ 0.46
RTFDC1Q9BY42 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTFDC1Q9BY42 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RTFDC1Q9BY42 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTFDC1Q9BY42 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTFDC1Q9BY42 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTFDC1Q9BY42 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTFDC1Q9BY42 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTFDC1Q9BY42 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTFDC1Q9BY42 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RTFDC1Q9BY42 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RTFDC1Q9BY42 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTFDC1Q9BY42 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTFDC1Q9BY42 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RTFDC1Q9BY42 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RTFDC1Q9BY42 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTFDC1Q9BY42 AC012362.1-201ENST00000434906 739 ntBASIC17.94■□□□□ 0.46
RTFDC1Q9BY42 OR2R1P-201ENST00000441404 914 ntBASIC17.94■□□□□ 0.46
RTFDC1Q9BY42 AC018463.1-201ENST00000456674 917 ntBASIC17.94■□□□□ 0.46
RTFDC1Q9BY42 RHEB-207ENST00000496004 744 ntTSL 2 BASIC17.94■□□□□ 0.46
RTFDC1Q9BY42 MRPL22P1-201ENST00000505398 616 ntBASIC17.94■□□□□ 0.46
RTFDC1Q9BY42 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC17.94■□□□□ 0.46
RTFDC1Q9BY42 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC17.94■□□□□ 0.46
RTFDC1Q9BY42 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC17.94■□□□□ 0.46
RTFDC1Q9BY42 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC17.94■□□□□ 0.46
RTFDC1Q9BY42 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
RTFDC1Q9BY42 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
RTFDC1Q9BY42 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.94■□□□□ 0.46
RTFDC1Q9BY42 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RTFDC1Q9BY42 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTFDC1Q9BY42 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC17.94■□□□□ 0.46
RTFDC1Q9BY42 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTFDC1Q9BY42 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTFDC1Q9BY42 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTFDC1Q9BY42 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
RTFDC1Q9BY42 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTFDC1Q9BY42 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RTFDC1Q9BY42 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.94■□□□□ 0.46
RTFDC1Q9BY42 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RTFDC1Q9BY42 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC17.93■□□□□ 0.46
RTFDC1Q9BY42 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
RTFDC1Q9BY42 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC17.93■□□□□ 0.46
RTFDC1Q9BY42 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RTFDC1Q9BY42 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTFDC1Q9BY42 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RTFDC1Q9BY42 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTFDC1Q9BY42 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTFDC1Q9BY42 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RTFDC1Q9BY42 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC17.93■□□□□ 0.46
RTFDC1Q9BY42 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTFDC1Q9BY42 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC17.93■□□□□ 0.46
RTFDC1Q9BY42 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC17.93■□□□□ 0.46
RTFDC1Q9BY42 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC17.93■□□□□ 0.46
RTFDC1Q9BY42 ORAOV1P1-201ENST00000503108 395 ntBASIC17.93■□□□□ 0.46
RTFDC1Q9BY42 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RTFDC1Q9BY42 AC007326.1-201ENST00000604539 458 ntBASIC17.93■□□□□ 0.46
RTFDC1Q9BY42 AC087392.5-201ENST00000612517 489 ntBASIC17.93■□□□□ 0.46
RTFDC1Q9BY42 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC17.93■□□□□ 0.46
RTFDC1Q9BY42 AC105137.3-201ENST00000617588 984 ntBASIC17.93■□□□□ 0.46
RTFDC1Q9BY42 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
RTFDC1Q9BY42 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms