Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 AL359881.3-201ENST00000602640 1721 ntBASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 AC009477.1-201ENST00000452936 217 ntBASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 AC004461.2-201ENST00000629517 803 ntBASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 KRT18P43-201ENST00000469825 1281 ntBASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 TIMM17BP1-201ENST00000545713 516 ntBASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 AC009407.1-201ENST00000568958 598 ntBASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms