Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LITAFQ99732 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LITAFQ99732 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LITAFQ99732 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC9.99□□□□□ -0.81
LITAFQ99732 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC9.99□□□□□ -0.81
LITAFQ99732 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC9.99□□□□□ -0.81
LITAFQ99732 USP40-206ENST00000443711 628 ntTSL 2 BASIC9.99□□□□□ -0.81
LITAFQ99732 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC9.99□□□□□ -0.81
LITAFQ99732 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC9.99□□□□□ -0.81
LITAFQ99732 UNC93B6-202ENST00000528242 690 ntBASIC9.99□□□□□ -0.81
LITAFQ99732 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC9.99□□□□□ -0.81
LITAFQ99732 MAX-210ENST00000555419 765 ntTSL 5 BASIC9.99□□□□□ -0.81
LITAFQ99732 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC9.99□□□□□ -0.81
LITAFQ99732 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC9.99□□□□□ -0.81
LITAFQ99732 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC9.99□□□□□ -0.81
LITAFQ99732 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC9.99□□□□□ -0.81
LITAFQ99732 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC9.99□□□□□ -0.81
LITAFQ99732 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
LITAFQ99732 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC9.99□□□□□ -0.81
LITAFQ99732 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC9.99□□□□□ -0.81
LITAFQ99732 AC099522.2-201ENST00000607001 744 ntBASIC9.99□□□□□ -0.81
LITAFQ99732 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC9.99□□□□□ -0.81
LITAFQ99732 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
LITAFQ99732 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC9.99□□□□□ -0.81
LITAFQ99732 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LITAFQ99732 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LITAFQ99732 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LITAFQ99732 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LITAFQ99732 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
LITAFQ99732 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LITAFQ99732 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
LITAFQ99732 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC9.99□□□□□ -0.81
LITAFQ99732 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC9.99□□□□□ -0.81
LITAFQ99732 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LITAFQ99732 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC9.99□□□□□ -0.81
LITAFQ99732 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC9.99□□□□□ -0.81
LITAFQ99732 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
LITAFQ99732 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LITAFQ99732 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LITAFQ99732 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LITAFQ99732 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
LITAFQ99732 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
LITAFQ99732 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC9.99□□□□□ -0.81
LITAFQ99732 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LITAFQ99732 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC9.99□□□□□ -0.81
LITAFQ99732 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LITAFQ99732 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC9.99□□□□□ -0.81
LITAFQ99732 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
LITAFQ99732 HPD-204ENST00000543163 1709 ntTSL 5 BASIC9.99□□□□□ -0.81
LITAFQ99732 FUK-202ENST00000378912 3925 ntTSL 2 BASIC9.99□□□□□ -0.81
LITAFQ99732 AC025580.3-201ENST00000617932 1424 ntBASIC9.99□□□□□ -0.81
LITAFQ99732 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
LITAFQ99732 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
LITAFQ99732 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
LITAFQ99732 MKRN5P-201ENST00000445263 1467 ntBASIC9.98□□□□□ -0.81
LITAFQ99732 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
LITAFQ99732 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
LITAFQ99732 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC9.98□□□□□ -0.81
LITAFQ99732 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LITAFQ99732 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LITAFQ99732 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC9.98□□□□□ -0.81
LITAFQ99732 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
LITAFQ99732 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LITAFQ99732 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LITAFQ99732 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
LITAFQ99732 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LITAFQ99732 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
LITAFQ99732 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC9.98□□□□□ -0.81
LITAFQ99732 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC9.98□□□□□ -0.81
LITAFQ99732 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LITAFQ99732 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC9.98□□□□□ -0.81
LITAFQ99732 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LITAFQ99732 VENTXP1-201ENST00000569334 2716 ntBASIC9.98□□□□□ -0.81
LITAFQ99732 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC9.98□□□□□ -0.81
LITAFQ99732 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LITAFQ99732 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LITAFQ99732 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
LITAFQ99732 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC9.98□□□□□ -0.81
LITAFQ99732 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC9.98□□□□□ -0.81
LITAFQ99732 COPS8-203ENST00000409334 794 ntTSL 5 BASIC9.98□□□□□ -0.81
LITAFQ99732 AC211429.1-201ENST00000415277 523 ntBASIC9.98□□□□□ -0.81
LITAFQ99732 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC9.98□□□□□ -0.81
LITAFQ99732 AC136604.1-202ENST00000425471 771 ntBASIC9.98□□□□□ -0.81
LITAFQ99732 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC9.98□□□□□ -0.81
LITAFQ99732 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC9.98□□□□□ -0.81
LITAFQ99732 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC9.98□□□□□ -0.81
LITAFQ99732 AC018712.1-201ENST00000455767 687 ntBASIC9.98□□□□□ -0.81
LITAFQ99732 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC9.98□□□□□ -0.81
LITAFQ99732 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC9.98□□□□□ -0.81
LITAFQ99732 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC9.98□□□□□ -0.81
LITAFQ99732 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC9.98□□□□□ -0.81
LITAFQ99732 AC093827.2-201ENST00000512654 315 ntBASIC9.98□□□□□ -0.81
LITAFQ99732 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC9.98□□□□□ -0.81
LITAFQ99732 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LITAFQ99732 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC9.98□□□□□ -0.81
LITAFQ99732 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
LITAFQ99732 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC9.98□□□□□ -0.81
LITAFQ99732 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC9.98□□□□□ -0.81
LITAFQ99732 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC9.98□□□□□ -0.81
LITAFQ99732 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms