Protein–RNA interactions for Protein: Q96RT7

TUBGCP6, Gamma-tubulin complex component 6, humanhuman

Predictions only

Length 1,819 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP6Q96RT7 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TUBGCP6Q96RT7 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TUBGCP6Q96RT7 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TUBGCP6Q96RT7 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TUBGCP6Q96RT7 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TUBGCP6Q96RT7 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC18.79■□□□□ 0.6
TUBGCP6Q96RT7 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TUBGCP6Q96RT7 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TUBGCP6Q96RT7 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TUBGCP6Q96RT7 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC18.79■□□□□ 0.6
TUBGCP6Q96RT7 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TUBGCP6Q96RT7 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC18.79■□□□□ 0.6
TUBGCP6Q96RT7 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC18.79■□□□□ 0.6
TUBGCP6Q96RT7 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC18.79■□□□□ 0.6
TUBGCP6Q96RT7 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC18.79■□□□□ 0.6
TUBGCP6Q96RT7 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC18.79■□□□□ 0.6
TUBGCP6Q96RT7 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TUBGCP6Q96RT7 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TUBGCP6Q96RT7 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TUBGCP6Q96RT7 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
TUBGCP6Q96RT7 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TUBGCP6Q96RT7 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TUBGCP6Q96RT7 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC18.79■□□□□ 0.6
TUBGCP6Q96RT7 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC18.79■□□□□ 0.6
TUBGCP6Q96RT7 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC18.79■□□□□ 0.6
TUBGCP6Q96RT7 AC009884.2-201ENST00000603110 324 ntBASIC18.79■□□□□ 0.6
TUBGCP6Q96RT7 MIR6769A-201ENST00000617340 73 ntBASIC18.79■□□□□ 0.6
TUBGCP6Q96RT7 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TUBGCP6Q96RT7 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC18.79■□□□□ 0.6
TUBGCP6Q96RT7 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC18.79■□□□□ 0.6
TUBGCP6Q96RT7 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC18.78■□□□□ 0.6
TUBGCP6Q96RT7 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC18.78■□□□□ 0.6
TUBGCP6Q96RT7 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC18.78■□□□□ 0.6
TUBGCP6Q96RT7 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TUBGCP6Q96RT7 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TUBGCP6Q96RT7 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TUBGCP6Q96RT7 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
TUBGCP6Q96RT7 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TUBGCP6Q96RT7 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TUBGCP6Q96RT7 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TUBGCP6Q96RT7 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC18.78■□□□□ 0.6
TUBGCP6Q96RT7 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TUBGCP6Q96RT7 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC18.78■□□□□ 0.6
TUBGCP6Q96RT7 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TUBGCP6Q96RT7 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TUBGCP6Q96RT7 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC18.78■□□□□ 0.6
TUBGCP6Q96RT7 SKA2-202ENST00000437036 625 ntTSL 2 BASIC18.78■□□□□ 0.6
TUBGCP6Q96RT7 AL354861.1-201ENST00000445213 355 ntBASIC18.78■□□□□ 0.6
TUBGCP6Q96RT7 THY1-209ENST00000580275 578 ntTSL 3 BASIC18.78■□□□□ 0.6
TUBGCP6Q96RT7 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC18.78■□□□□ 0.6
TUBGCP6Q96RT7 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TUBGCP6Q96RT7 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TUBGCP6Q96RT7 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TUBGCP6Q96RT7 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TUBGCP6Q96RT7 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TUBGCP6Q96RT7 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TUBGCP6Q96RT7 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC18.77■□□□□ 0.6
TUBGCP6Q96RT7 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TUBGCP6Q96RT7 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC18.77■□□□□ 0.6
TUBGCP6Q96RT7 CICP23-201ENST00000605013 2741 ntBASIC18.77■□□□□ 0.6
TUBGCP6Q96RT7 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TUBGCP6Q96RT7 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TUBGCP6Q96RT7 BANF1P3-201ENST00000412556 261 ntBASIC18.77■□□□□ 0.6
TUBGCP6Q96RT7 AC244197.1-201ENST00000456494 951 ntBASIC18.77■□□□□ 0.6
TUBGCP6Q96RT7 AC024293.1-201ENST00000467930 498 ntBASIC18.77■□□□□ 0.6
TUBGCP6Q96RT7 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC18.77■□□□□ 0.6
TUBGCP6Q96RT7 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC18.77■□□□□ 0.6
TUBGCP6Q96RT7 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC18.77■□□□□ 0.6
TUBGCP6Q96RT7 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC18.77■□□□□ 0.6
TUBGCP6Q96RT7 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
TUBGCP6Q96RT7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.77■□□□□ 0.6
TUBGCP6Q96RT7 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TUBGCP6Q96RT7 AC011270.2-201ENST00000624293 2550 ntBASIC18.77■□□□□ 0.6
TUBGCP6Q96RT7 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TUBGCP6Q96RT7 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
TUBGCP6Q96RT7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
TUBGCP6Q96RT7 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TUBGCP6Q96RT7 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC18.77■□□□□ 0.6
TUBGCP6Q96RT7 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC18.77■□□□□ 0.6
TUBGCP6Q96RT7 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TUBGCP6Q96RT7 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TUBGCP6Q96RT7 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TUBGCP6Q96RT7 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TUBGCP6Q96RT7 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC18.77■□□□□ 0.59
TUBGCP6Q96RT7 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC18.77■□□□□ 0.59
TUBGCP6Q96RT7 DPY19L2P5-201ENST00000456300 331 ntBASIC18.77■□□□□ 0.59
TUBGCP6Q96RT7 AC093909.3-201ENST00000504783 336 ntBASIC18.77■□□□□ 0.59
TUBGCP6Q96RT7 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC18.77■□□□□ 0.59
TUBGCP6Q96RT7 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC18.77■□□□□ 0.59
TUBGCP6Q96RT7 AC007952.4-201ENST00000573866 637 ntBASIC18.77■□□□□ 0.59
TUBGCP6Q96RT7 RPS15-202ENST00000585665 467 ntTSL 3 BASIC18.77■□□□□ 0.59
TUBGCP6Q96RT7 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TUBGCP6Q96RT7 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
TUBGCP6Q96RT7 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
TUBGCP6Q96RT7 AL137783.1-201ENST00000623494 1896 ntBASIC18.77■□□□□ 0.59
TUBGCP6Q96RT7 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TUBGCP6Q96RT7 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TUBGCP6Q96RT7 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TUBGCP6Q96RT7 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TUBGCP6Q96RT7 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms