Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
CASKIN1Q8WXD9 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
CASKIN1Q8WXD9 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC22.78■■□□□ 1.24
CASKIN1Q8WXD9 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC22.78■■□□□ 1.24
CASKIN1Q8WXD9 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CASKIN1Q8WXD9 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC22.78■■□□□ 1.24
CASKIN1Q8WXD9 AL031713.1-201ENST00000564813 661 ntBASIC22.78■■□□□ 1.24
CASKIN1Q8WXD9 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC22.78■■□□□ 1.24
CASKIN1Q8WXD9 WT1-AS_6.1-201ENST00000614919 121 ntBASIC22.78■■□□□ 1.24
CASKIN1Q8WXD9 AC025262.2-201ENST00000623975 1056 ntBASIC22.78■■□□□ 1.24
CASKIN1Q8WXD9 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC22.78■■□□□ 1.24
CASKIN1Q8WXD9 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CASKIN1Q8WXD9 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
CASKIN1Q8WXD9 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC22.78■■□□□ 1.24
CASKIN1Q8WXD9 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
CASKIN1Q8WXD9 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC22.78■■□□□ 1.24
CASKIN1Q8WXD9 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC22.78■■□□□ 1.24
CASKIN1Q8WXD9 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC22.78■■□□□ 1.24
CASKIN1Q8WXD9 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CASKIN1Q8WXD9 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CASKIN1Q8WXD9 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC22.77■■□□□ 1.24
CASKIN1Q8WXD9 GSN-215ENST00000545652 2428 ntTSL 2 BASIC22.77■■□□□ 1.24
CASKIN1Q8WXD9 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
CASKIN1Q8WXD9 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC22.77■■□□□ 1.24
CASKIN1Q8WXD9 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CASKIN1Q8WXD9 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC22.77■■□□□ 1.24
CASKIN1Q8WXD9 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
CASKIN1Q8WXD9 AC023157.3-201ENST00000619086 2088 ntBASIC22.77■■□□□ 1.24
CASKIN1Q8WXD9 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
CASKIN1Q8WXD9 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
CASKIN1Q8WXD9 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
CASKIN1Q8WXD9 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CASKIN1Q8WXD9 AL807761.2-201ENST00000422849 729 ntBASIC22.77■■□□□ 1.24
CASKIN1Q8WXD9 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CASKIN1Q8WXD9 DUX4L50-201ENST00000455245 715 ntBASIC22.77■■□□□ 1.24
CASKIN1Q8WXD9 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC22.77■■□□□ 1.24
CASKIN1Q8WXD9 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC22.77■■□□□ 1.24
CASKIN1Q8WXD9 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
CASKIN1Q8WXD9 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC22.77■■□□□ 1.24
CASKIN1Q8WXD9 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC22.77■■□□□ 1.24
CASKIN1Q8WXD9 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC22.77■■□□□ 1.24
CASKIN1Q8WXD9 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC22.77■■□□□ 1.24
CASKIN1Q8WXD9 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
CASKIN1Q8WXD9 AL354702.1-201ENST00000442006 1960 ntBASIC22.77■■□□□ 1.24
CASKIN1Q8WXD9 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC22.77■■□□□ 1.24
CASKIN1Q8WXD9 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CASKIN1Q8WXD9 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
CASKIN1Q8WXD9 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
CASKIN1Q8WXD9 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CASKIN1Q8WXD9 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CASKIN1Q8WXD9 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CASKIN1Q8WXD9 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CASKIN1Q8WXD9 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
CASKIN1Q8WXD9 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC22.77■■□□□ 1.23
CASKIN1Q8WXD9 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC22.77■■□□□ 1.23
CASKIN1Q8WXD9 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC22.77■■□□□ 1.23
CASKIN1Q8WXD9 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CASKIN1Q8WXD9 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
CASKIN1Q8WXD9 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC22.76■■□□□ 1.23
CASKIN1Q8WXD9 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
CASKIN1Q8WXD9 AP000356.3-201ENST00000382243 753 ntBASIC22.76■■□□□ 1.23
CASKIN1Q8WXD9 PFN2-202ENST00000423691 911 ntTSL 2 BASIC22.76■■□□□ 1.23
CASKIN1Q8WXD9 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC22.76■■□□□ 1.23
CASKIN1Q8WXD9 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC22.76■■□□□ 1.23
CASKIN1Q8WXD9 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC22.76■■□□□ 1.23
CASKIN1Q8WXD9 CHCHD2P9-201ENST00000461726 456 ntBASIC22.76■■□□□ 1.23
CASKIN1Q8WXD9 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC22.76■■□□□ 1.23
CASKIN1Q8WXD9 RN7SL81P-201ENST00000493781 261 ntBASIC22.76■■□□□ 1.23
CASKIN1Q8WXD9 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC22.76■■□□□ 1.23
CASKIN1Q8WXD9 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CASKIN1Q8WXD9 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC22.76■■□□□ 1.23
CASKIN1Q8WXD9 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CASKIN1Q8WXD9 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC22.76■■□□□ 1.23
CASKIN1Q8WXD9 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC22.76■■□□□ 1.23
CASKIN1Q8WXD9 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
CASKIN1Q8WXD9 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC22.76■■□□□ 1.23
CASKIN1Q8WXD9 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC22.76■■□□□ 1.23
CASKIN1Q8WXD9 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
CASKIN1Q8WXD9 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC22.76■■□□□ 1.23
CASKIN1Q8WXD9 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
CASKIN1Q8WXD9 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
CASKIN1Q8WXD9 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CASKIN1Q8WXD9 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
CASKIN1Q8WXD9 AC092384.3-202ENST00000564646 2873 ntBASIC22.76■■□□□ 1.23
CASKIN1Q8WXD9 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
CASKIN1Q8WXD9 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
CASKIN1Q8WXD9 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
CASKIN1Q8WXD9 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CASKIN1Q8WXD9 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CASKIN1Q8WXD9 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC22.75■■□□□ 1.23
CASKIN1Q8WXD9 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CASKIN1Q8WXD9 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CASKIN1Q8WXD9 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC22.75■■□□□ 1.23
CASKIN1Q8WXD9 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC22.75■■□□□ 1.23
CASKIN1Q8WXD9 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CASKIN1Q8WXD9 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
CASKIN1Q8WXD9 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CASKIN1Q8WXD9 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CASKIN1Q8WXD9 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC22.75■■□□□ 1.23
CASKIN1Q8WXD9 KRT8P1-201ENST00000557533 1207 ntBASIC22.75■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms