Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC15.02■□□□□ -0
HMGB4Q8WW32 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
HMGB4Q8WW32 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.02■□□□□ -0
HMGB4Q8WW32 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.02■□□□□ -0
HMGB4Q8WW32 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HMGB4Q8WW32 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.02■□□□□ -0
HMGB4Q8WW32 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
HMGB4Q8WW32 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HMGB4Q8WW32 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.02■□□□□ -0
HMGB4Q8WW32 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
HMGB4Q8WW32 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.02■□□□□ -0
HMGB4Q8WW32 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HMGB4Q8WW32 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC15.02■□□□□ -0
HMGB4Q8WW32 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HMGB4Q8WW32 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC15.02■□□□□ -0
HMGB4Q8WW32 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC15.02■□□□□ -0
HMGB4Q8WW32 AC010141.1-201ENST00000411585 623 ntBASIC15.02■□□□□ -0
HMGB4Q8WW32 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC15.02■□□□□ -0
HMGB4Q8WW32 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC15.02■□□□□ -0
HMGB4Q8WW32 FAM58BP-201ENST00000439056 645 ntBASIC15.02■□□□□ -0
HMGB4Q8WW32 AC006335.1-201ENST00000445200 547 ntBASIC15.02■□□□□ -0
HMGB4Q8WW32 AC234782.1-201ENST00000451950 919 ntBASIC15.02■□□□□ -0
HMGB4Q8WW32 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC15.02■□□□□ -0
HMGB4Q8WW32 AL160314.3-201ENST00000556041 767 ntBASIC15.02■□□□□ -0
HMGB4Q8WW32 MIR5572-201ENST00000583188 137 ntBASIC15.02■□□□□ -0
HMGB4Q8WW32 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC15.02■□□□□ -0
HMGB4Q8WW32 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC15.02■□□□□ -0
HMGB4Q8WW32 AF254983.2-201ENST00000612331 135 ntBASIC15.02■□□□□ -0
HMGB4Q8WW32 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC15.02■□□□□ -0
HMGB4Q8WW32 NAP1L6-202ENST00000641404 1222 ntBASIC15.02■□□□□ -0
HMGB4Q8WW32 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.02□□□□□ -0.01
HMGB4Q8WW32 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HMGB4Q8WW32 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.02□□□□□ -0.01
HMGB4Q8WW32 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.02□□□□□ -0.01
HMGB4Q8WW32 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
HMGB4Q8WW32 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.02□□□□□ -0.01
HMGB4Q8WW32 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HMGB4Q8WW32 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.02□□□□□ -0.01
HMGB4Q8WW32 AL513523.2-202ENST00000427283 2040 ntBASIC15.02□□□□□ -0.01
HMGB4Q8WW32 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HMGB4Q8WW32 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
HMGB4Q8WW32 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
HMGB4Q8WW32 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
HMGB4Q8WW32 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGB4Q8WW32 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGB4Q8WW32 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.01□□□□□ -0.01
HMGB4Q8WW32 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
HMGB4Q8WW32 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
HMGB4Q8WW32 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HMGB4Q8WW32 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGB4Q8WW32 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
HMGB4Q8WW32 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HMGB4Q8WW32 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.01□□□□□ -0.01
HMGB4Q8WW32 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.01□□□□□ -0.01
HMGB4Q8WW32 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGB4Q8WW32 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGB4Q8WW32 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGB4Q8WW32 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGB4Q8WW32 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGB4Q8WW32 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGB4Q8WW32 RN7SKP214-201ENST00000364208 315 ntBASIC15.01□□□□□ -0.01
HMGB4Q8WW32 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HMGB4Q8WW32 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HMGB4Q8WW32 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC15.01□□□□□ -0.01
HMGB4Q8WW32 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC15.01□□□□□ -0.01
HMGB4Q8WW32 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC15.01□□□□□ -0.01
HMGB4Q8WW32 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.01□□□□□ -0.01
HMGB4Q8WW32 RCC2P8-201ENST00000502779 1035 ntBASIC15.01□□□□□ -0.01
HMGB4Q8WW32 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC15.01□□□□□ -0.01
HMGB4Q8WW32 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC15.01□□□□□ -0.01
HMGB4Q8WW32 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC15.01□□□□□ -0.01
HMGB4Q8WW32 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC15.01□□□□□ -0.01
HMGB4Q8WW32 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC15.01□□□□□ -0.01
HMGB4Q8WW32 SNORD3B-2-202ENST00000571722 791 ntBASIC15.01□□□□□ -0.01
HMGB4Q8WW32 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC15.01□□□□□ -0.01
HMGB4Q8WW32 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGB4Q8WW32 AC020922.3-201ENST00000595064 547 ntBASIC15.01□□□□□ -0.01
HMGB4Q8WW32 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC15.01□□□□□ -0.01
HMGB4Q8WW32 AC012044.1-201ENST00000603431 297 ntBASIC15.01□□□□□ -0.01
HMGB4Q8WW32 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGB4Q8WW32 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
HMGB4Q8WW32 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HMGB4Q8WW32 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGB4Q8WW32 AC007950.2-201ENST00000615045 2347 ntBASIC15.01□□□□□ -0.01
HMGB4Q8WW32 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGB4Q8WW32 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
HMGB4Q8WW32 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HMGB4Q8WW32 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HMGB4Q8WW32 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGB4Q8WW32 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HMGB4Q8WW32 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.01□□□□□ -0.01
HMGB4Q8WW32 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.01□□□□□ -0.01
HMGB4Q8WW32 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.01□□□□□ -0.01
HMGB4Q8WW32 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGB4Q8WW32 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HMGB4Q8WW32 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGB4Q8WW32 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HMGB4Q8WW32 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGB4Q8WW32 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGB4Q8WW32 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms