Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NEDD1Q8NHV4 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NEDD1Q8NHV4 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NEDD1Q8NHV4 NPPA-201ENST00000376476 728 ntTSL 3 BASIC17.35■□□□□ 0.37
NEDD1Q8NHV4 AL157407.1-201ENST00000435784 904 ntBASIC17.35■□□□□ 0.37
NEDD1Q8NHV4 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NEDD1Q8NHV4 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC17.35■□□□□ 0.37
NEDD1Q8NHV4 AC005740.2-201ENST00000511085 419 ntBASIC17.35■□□□□ 0.37
NEDD1Q8NHV4 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC17.35■□□□□ 0.37
NEDD1Q8NHV4 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC17.35■□□□□ 0.37
NEDD1Q8NHV4 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.35■□□□□ 0.37
NEDD1Q8NHV4 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.35■□□□□ 0.37
NEDD1Q8NHV4 MIR6720-201ENST00000611664 98 ntBASIC17.35■□□□□ 0.37
NEDD1Q8NHV4 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
NEDD1Q8NHV4 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
NEDD1Q8NHV4 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NEDD1Q8NHV4 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NEDD1Q8NHV4 AL008718.2-201ENST00000609206 1313 ntBASIC17.35■□□□□ 0.37
NEDD1Q8NHV4 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NEDD1Q8NHV4 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
NEDD1Q8NHV4 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.35■□□□□ 0.37
NEDD1Q8NHV4 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NEDD1Q8NHV4 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
NEDD1Q8NHV4 AL590440.2-201ENST00000641973 1595 ntBASIC17.35■□□□□ 0.37
NEDD1Q8NHV4 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NEDD1Q8NHV4 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NEDD1Q8NHV4 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NEDD1Q8NHV4 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NEDD1Q8NHV4 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC17.35■□□□□ 0.37
NEDD1Q8NHV4 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NEDD1Q8NHV4 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.35■□□□□ 0.37
NEDD1Q8NHV4 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
NEDD1Q8NHV4 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
NEDD1Q8NHV4 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 AC144831.1-201ENST00000573312 2656 ntBASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 VDAC1P1-201ENST00000439229 848 ntBASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 HIST2H2BC-201ENST00000498492 580 ntBASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 CSH2-206ENST00000560142 749 ntTSL 5 BASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 AC103988.2-201ENST00000561804 725 ntBASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 AC018529.2-202ENST00000611482 3087 ntBASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 AP000346.4-201ENST00000614827 381 ntBASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC17.34■□□□□ 0.37
NEDD1Q8NHV4 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NEDD1Q8NHV4 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC17.33■□□□□ 0.37
NEDD1Q8NHV4 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NEDD1Q8NHV4 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NEDD1Q8NHV4 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.33■□□□□ 0.37
NEDD1Q8NHV4 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NEDD1Q8NHV4 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NEDD1Q8NHV4 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NEDD1Q8NHV4 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC17.33■□□□□ 0.37
NEDD1Q8NHV4 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
NEDD1Q8NHV4 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NEDD1Q8NHV4 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NEDD1Q8NHV4 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
NEDD1Q8NHV4 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NEDD1Q8NHV4 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NEDD1Q8NHV4 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms