Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.39□□□□□ -0.11
SRFBP1Q8NEF9 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.39□□□□□ -0.11
SRFBP1Q8NEF9 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.39□□□□□ -0.11
SRFBP1Q8NEF9 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
SRFBP1Q8NEF9 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRFBP1Q8NEF9 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.39□□□□□ -0.11
SRFBP1Q8NEF9 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.39□□□□□ -0.11
SRFBP1Q8NEF9 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.39□□□□□ -0.11
SRFBP1Q8NEF9 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRFBP1Q8NEF9 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.39□□□□□ -0.11
SRFBP1Q8NEF9 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SRFBP1Q8NEF9 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.39□□□□□ -0.11
SRFBP1Q8NEF9 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRFBP1Q8NEF9 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.39□□□□□ -0.11
SRFBP1Q8NEF9 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SRFBP1Q8NEF9 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
SRFBP1Q8NEF9 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRFBP1Q8NEF9 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 AC018665.1-201ENST00000622927 1362 ntBASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 AC005229.1-201ENST00000392885 409 ntBASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 AL512384.1-201ENST00000406683 331 ntBASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
SRFBP1Q8NEF9 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 TLE1P1-201ENST00000422965 589 ntBASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 EIF3FP3-201ENST00000434851 1086 ntBASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 COX20P2-201ENST00000452636 358 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms