Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF44Q7L0R7 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF44Q7L0R7 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.43□□□□□ -0.1
RNF44Q7L0R7 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.43□□□□□ -0.1
RNF44Q7L0R7 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.43□□□□□ -0.1
RNF44Q7L0R7 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.43□□□□□ -0.1
RNF44Q7L0R7 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF44Q7L0R7 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF44Q7L0R7 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF44Q7L0R7 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RNF44Q7L0R7 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.43□□□□□ -0.1
RNF44Q7L0R7 AC099336.1-201ENST00000417053 1171 ntBASIC14.43□□□□□ -0.1
RNF44Q7L0R7 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.43□□□□□ -0.1
RNF44Q7L0R7 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.43□□□□□ -0.1
RNF44Q7L0R7 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.43□□□□□ -0.1
RNF44Q7L0R7 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.43□□□□□ -0.1
RNF44Q7L0R7 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.43□□□□□ -0.1
RNF44Q7L0R7 AC008687.7-202ENST00000637404 953 ntBASIC14.43□□□□□ -0.1
RNF44Q7L0R7 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF44Q7L0R7 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF44Q7L0R7 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF44Q7L0R7 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.43□□□□□ -0.1
RNF44Q7L0R7 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF44Q7L0R7 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RNF44Q7L0R7 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF44Q7L0R7 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF44Q7L0R7 AGAP7P-201ENST00000582299 2062 ntBASIC14.43□□□□□ -0.1
RNF44Q7L0R7 AGAP14-201ENST00000624701 2060 ntBASIC14.43□□□□□ -0.1
RNF44Q7L0R7 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF44Q7L0R7 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF44Q7L0R7 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
RNF44Q7L0R7 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.43□□□□□ -0.1
RNF44Q7L0R7 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF44Q7L0R7 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.43□□□□□ -0.1
RNF44Q7L0R7 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RNF44Q7L0R7 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
RNF44Q7L0R7 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.43□□□□□ -0.1
RNF44Q7L0R7 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.43□□□□□ -0.1
RNF44Q7L0R7 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.42□□□□□ -0.1
RNF44Q7L0R7 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNF44Q7L0R7 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RNF44Q7L0R7 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
RNF44Q7L0R7 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNF44Q7L0R7 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
RNF44Q7L0R7 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNF44Q7L0R7 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNF44Q7L0R7 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNF44Q7L0R7 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNF44Q7L0R7 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RNF44Q7L0R7 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.42□□□□□ -0.1
RNF44Q7L0R7 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.42□□□□□ -0.1
RNF44Q7L0R7 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNF44Q7L0R7 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNF44Q7L0R7 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.42□□□□□ -0.1
RNF44Q7L0R7 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNF44Q7L0R7 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.42□□□□□ -0.1
RNF44Q7L0R7 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
RNF44Q7L0R7 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNF44Q7L0R7 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNF44Q7L0R7 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.42□□□□□ -0.1
RNF44Q7L0R7 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNF44Q7L0R7 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.42□□□□□ -0.1
RNF44Q7L0R7 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.42□□□□□ -0.1
RNF44Q7L0R7 HLA-V-201ENST00000429037 534 ntBASIC14.42□□□□□ -0.1
RNF44Q7L0R7 AC026954.1-201ENST00000429771 1293 ntBASIC14.42□□□□□ -0.1
RNF44Q7L0R7 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.42□□□□□ -0.1
RNF44Q7L0R7 MESTP3-201ENST00000503460 968 ntBASIC14.42□□□□□ -0.1
RNF44Q7L0R7 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.42□□□□□ -0.1
RNF44Q7L0R7 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.42□□□□□ -0.1
RNF44Q7L0R7 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.42□□□□□ -0.1
RNF44Q7L0R7 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.42□□□□□ -0.1
RNF44Q7L0R7 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.42□□□□□ -0.1
RNF44Q7L0R7 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.42□□□□□ -0.1
RNF44Q7L0R7 AC138466.3-201ENST00000619983 221 ntBASIC14.42□□□□□ -0.1
RNF44Q7L0R7 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNF44Q7L0R7 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RNF44Q7L0R7 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.42□□□□□ -0.1
RNF44Q7L0R7 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNF44Q7L0R7 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
RNF44Q7L0R7 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNF44Q7L0R7 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RNF44Q7L0R7 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RNF44Q7L0R7 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.42□□□□□ -0.1
RNF44Q7L0R7 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNF44Q7L0R7 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.42□□□□□ -0.1
RNF44Q7L0R7 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNF44Q7L0R7 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.42□□□□□ -0.1
RNF44Q7L0R7 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF44Q7L0R7 CLUHP2-201ENST00000426660 1303 ntBASIC14.41□□□□□ -0.1
RNF44Q7L0R7 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RNF44Q7L0R7 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
RNF44Q7L0R7 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF44Q7L0R7 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF44Q7L0R7 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF44Q7L0R7 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF44Q7L0R7 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF44Q7L0R7 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.41□□□□□ -0.1
RNF44Q7L0R7 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.41□□□□□ -0.1
RNF44Q7L0R7 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF44Q7L0R7 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms