Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 BCRP1-201ENST00000444246 691 ntBASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 MEIS3P1-201ENST00000495167 958 ntBASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 LINC01115-203ENST00000606068 577 ntBASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 AC009118.2-201ENST00000613275 655 ntBASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 AF228730.6-201ENST00000641497 218 ntBASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 AC084121.3-201ENST00000641716 218 ntBASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 AP001267.2-201ENST00000532619 2086 ntBASIC13.12□□□□□ -0.31
ATPAF1Q5TC12 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ATPAF1Q5TC12 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ATPAF1Q5TC12 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ATPAF1Q5TC12 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ATPAF1Q5TC12 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ATPAF1Q5TC12 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ATPAF1Q5TC12 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ATPAF1Q5TC12 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ATPAF1Q5TC12 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
ATPAF1Q5TC12 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
ATPAF1Q5TC12 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
ATPAF1Q5TC12 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ATPAF1Q5TC12 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ATPAF1Q5TC12 AC107918.4-201ENST00000641966 3141 ntBASIC13.12□□□□□ -0.31
ATPAF1Q5TC12 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ATPAF1Q5TC12 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ATPAF1Q5TC12 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.12□□□□□ -0.31
ATPAF1Q5TC12 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.12□□□□□ -0.31
ATPAF1Q5TC12 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ATPAF1Q5TC12 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ATPAF1Q5TC12 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ATPAF1Q5TC12 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
ATPAF1Q5TC12 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.12□□□□□ -0.31
ATPAF1Q5TC12 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ATPAF1Q5TC12 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
ATPAF1Q5TC12 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
ATPAF1Q5TC12 AL133267.1-201ENST00000398220 340 ntBASIC13.12□□□□□ -0.31
ATPAF1Q5TC12 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.12□□□□□ -0.31
ATPAF1Q5TC12 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ATPAF1Q5TC12 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.12□□□□□ -0.31
ATPAF1Q5TC12 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
ATPAF1Q5TC12 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.12□□□□□ -0.31
ATPAF1Q5TC12 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.12□□□□□ -0.31
ATPAF1Q5TC12 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.12□□□□□ -0.31
ATPAF1Q5TC12 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ATPAF1Q5TC12 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.12□□□□□ -0.31
ATPAF1Q5TC12 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
ATPAF1Q5TC12 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.12□□□□□ -0.31
ATPAF1Q5TC12 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ATPAF1Q5TC12 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
ATPAF1Q5TC12 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ATPAF1Q5TC12 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ATPAF1Q5TC12 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ATPAF1Q5TC12 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
ATPAF1Q5TC12 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.12□□□□□ -0.31
ATPAF1Q5TC12 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ATPAF1Q5TC12 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ATPAF1Q5TC12 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ATPAF1Q5TC12 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms