Protein–RNA interactions for Protein: Q2NL82

TSR1, Pre-rRNA-processing protein TSR1 homolog, humanhuman

Known RBP Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1Q2NL82 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TSR1Q2NL82 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC16.6■□□□□ 0.25
TSR1Q2NL82 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TSR1Q2NL82 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TSR1Q2NL82 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TSR1Q2NL82 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TSR1Q2NL82 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.6■□□□□ 0.25
TSR1Q2NL82 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TSR1Q2NL82 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TSR1Q2NL82 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
TSR1Q2NL82 PMS2P2-201ENST00000425039 1128 ntBASIC16.6■□□□□ 0.25
TSR1Q2NL82 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TSR1Q2NL82 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TSR1Q2NL82 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.6■□□□□ 0.25
TSR1Q2NL82 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.6■□□□□ 0.25
TSR1Q2NL82 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.6■□□□□ 0.25
TSR1Q2NL82 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.6■□□□□ 0.25
TSR1Q2NL82 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TSR1Q2NL82 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.6■□□□□ 0.25
TSR1Q2NL82 AC004835.2-201ENST00000603762 682 ntBASIC16.6■□□□□ 0.25
TSR1Q2NL82 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.6■□□□□ 0.25
TSR1Q2NL82 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.6■□□□□ 0.25
TSR1Q2NL82 AF228730.6-201ENST00000641497 218 ntBASIC16.6■□□□□ 0.25
TSR1Q2NL82 AC084121.3-201ENST00000641716 218 ntBASIC16.6■□□□□ 0.25
TSR1Q2NL82 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
TSR1Q2NL82 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TSR1Q2NL82 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC16.6■□□□□ 0.25
TSR1Q2NL82 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TSR1Q2NL82 LILRP1-201ENST00000444199 1370 ntBASIC16.6■□□□□ 0.25
TSR1Q2NL82 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TSR1Q2NL82 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TSR1Q2NL82 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TSR1Q2NL82 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TSR1Q2NL82 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TSR1Q2NL82 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TSR1Q2NL82 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TSR1Q2NL82 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TSR1Q2NL82 AL121723.1-201ENST00000445194 1519 ntBASIC16.6■□□□□ 0.25
TSR1Q2NL82 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TSR1Q2NL82 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TSR1Q2NL82 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TSR1Q2NL82 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TSR1Q2NL82 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TSR1Q2NL82 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TSR1Q2NL82 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.59■□□□□ 0.25
TSR1Q2NL82 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.59■□□□□ 0.25
TSR1Q2NL82 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TSR1Q2NL82 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TSR1Q2NL82 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
TSR1Q2NL82 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC16.59■□□□□ 0.25
TSR1Q2NL82 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TSR1Q2NL82 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TSR1Q2NL82 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC16.59■□□□□ 0.25
TSR1Q2NL82 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TSR1Q2NL82 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TSR1Q2NL82 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TSR1Q2NL82 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
TSR1Q2NL82 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TSR1Q2NL82 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TSR1Q2NL82 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TSR1Q2NL82 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TSR1Q2NL82 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TSR1Q2NL82 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.59■□□□□ 0.25
TSR1Q2NL82 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.59■□□□□ 0.25
TSR1Q2NL82 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TSR1Q2NL82 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.59■□□□□ 0.25
TSR1Q2NL82 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.59■□□□□ 0.25
TSR1Q2NL82 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
TSR1Q2NL82 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TSR1Q2NL82 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC16.59■□□□□ 0.25
TSR1Q2NL82 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TSR1Q2NL82 AC025048.3-201ENST00000590609 569 ntBASIC16.59■□□□□ 0.25
TSR1Q2NL82 AC005702.4-201ENST00000618393 416 ntBASIC16.59■□□□□ 0.25
TSR1Q2NL82 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.59■□□□□ 0.25
TSR1Q2NL82 CBR3-AS1-213ENST00000623647 815 ntTSL 5 BASIC16.59■□□□□ 0.25
TSR1Q2NL82 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.59■□□□□ 0.25
TSR1Q2NL82 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.59■□□□□ 0.25
TSR1Q2NL82 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TSR1Q2NL82 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC16.59■□□□□ 0.25
TSR1Q2NL82 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TSR1Q2NL82 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TSR1Q2NL82 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TSR1Q2NL82 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TSR1Q2NL82 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TSR1Q2NL82 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
TSR1Q2NL82 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TSR1Q2NL82 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.59■□□□□ 0.25
TSR1Q2NL82 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TSR1Q2NL82 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
TSR1Q2NL82 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TSR1Q2NL82 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TSR1Q2NL82 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.59■□□□□ 0.25
TSR1Q2NL82 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TSR1Q2NL82 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC16.59■□□□□ 0.25
TSR1Q2NL82 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TSR1Q2NL82 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TSR1Q2NL82 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC16.58■□□□□ 0.25
TSR1Q2NL82 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
TSR1Q2NL82 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
TSR1Q2NL82 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms