Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 AL355994.2-201ENST00000447882 704 ntBASIC15.1■□□□□ 0.01
AP1S1P61966 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S1P61966 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.1■□□□□ 0.01
AP1S1P61966 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.1■□□□□ 0.01
AP1S1P61966 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.1■□□□□ 0.01
AP1S1P61966 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
AP1S1P61966 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S1P61966 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S1P61966 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.1■□□□□ 0.01
AP1S1P61966 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
AP1S1P61966 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.1■□□□□ 0.01
AP1S1P61966 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S1P61966 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S1P61966 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S1P61966 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
AP1S1P61966 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S1P61966 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S1P61966 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.1■□□□□ 0.01
AP1S1P61966 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.1■□□□□ 0.01
AP1S1P61966 TNRC18P2-201ENST00000417666 2714 ntBASIC15.09■□□□□ 0.01
AP1S1P61966 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP1S1P61966 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
AP1S1P61966 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
AP1S1P61966 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP1S1P61966 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
AP1S1P61966 MYO15B-237ENST00000642007 4893 ntBASIC15.09■□□□□ 0.01
AP1S1P61966 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
AP1S1P61966 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.09■□□□□ 0.01
AP1S1P61966 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP1S1P61966 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP1S1P61966 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
AP1S1P61966 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
AP1S1P61966 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
AP1S1P61966 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
AP1S1P61966 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.09■□□□□ 0.01
AP1S1P61966 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
AP1S1P61966 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
AP1S1P61966 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.09■□□□□ 0.01
AP1S1P61966 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.09■□□□□ 0.01
AP1S1P61966 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.09■□□□□ 0.01
AP1S1P61966 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.09■□□□□ 0.01
AP1S1P61966 BNIP3P42-201ENST00000454982 569 ntBASIC15.09■□□□□ 0.01
AP1S1P61966 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
AP1S1P61966 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.09■□□□□ 0.01
AP1S1P61966 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
AP1S1P61966 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.09■□□□□ 0.01
AP1S1P61966 ALG3P1-201ENST00000508806 1114 ntBASIC15.09■□□□□ 0.01
AP1S1P61966 GCOM2-201ENST00000509133 1104 ntBASIC15.09■□□□□ 0.01
AP1S1P61966 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.09■□□□□ 0.01
AP1S1P61966 PPY2P-201ENST00000582808 702 ntBASIC15.09■□□□□ 0.01
AP1S1P61966 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
AP1S1P61966 BNIP3P29-201ENST00000598302 571 ntBASIC15.09■□□□□ 0.01
AP1S1P61966 AL008721.1-201ENST00000609964 604 ntBASIC15.09■□□□□ 0.01
AP1S1P61966 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.09■□□□□ 0.01
AP1S1P61966 AC011447.5-201ENST00000616168 564 ntBASIC15.09■□□□□ 0.01
AP1S1P61966 MIR6752-201ENST00000618442 71 ntBASIC15.09■□□□□ 0.01
AP1S1P61966 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.09■□□□□ 0.01
AP1S1P61966 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.09■□□□□ 0.01
AP1S1P61966 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
AP1S1P61966 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP1S1P61966 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP1S1P61966 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.09■□□□□ 0.01
AP1S1P61966 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.09■□□□□ 0.01
AP1S1P61966 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
AP1S1P61966 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
AP1S1P61966 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.09■□□□□ 0.01
AP1S1P61966 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.09■□□□□ 0.01
AP1S1P61966 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP1S1P61966 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
AP1S1P61966 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
AP1S1P61966 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
AP1S1P61966 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
AP1S1P61966 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
AP1S1P61966 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.08■□□□□ 0.01
AP1S1P61966 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.08■□□□□ 0.01
AP1S1P61966 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
AP1S1P61966 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
AP1S1P61966 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
AP1S1P61966 INE2-201ENST00000630399 1874 ntBASIC15.08■□□□□ 0.01
AP1S1P61966 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
AP1S1P61966 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
AP1S1P61966 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0
AP1S1P61966 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
AP1S1P61966 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
AP1S1P61966 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
AP1S1P61966 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
AP1S1P61966 CICP23-201ENST00000605013 2741 ntBASIC15.08■□□□□ 0
AP1S1P61966 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
AP1S1P61966 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.08■□□□□ 0
AP1S1P61966 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.08■□□□□ 0
AP1S1P61966 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.08■□□□□ 0
AP1S1P61966 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.08■□□□□ 0
AP1S1P61966 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.08■□□□□ 0
AP1S1P61966 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.08■□□□□ 0
AP1S1P61966 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
AP1S1P61966 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
AP1S1P61966 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.08■□□□□ 0
AP1S1P61966 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
AP1S1P61966 AC002472.3-201ENST00000640124 621 ntBASIC15.08■□□□□ 0
AP1S1P61966 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms