Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
VBP1P61758 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VBP1P61758 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VBP1P61758 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
VBP1P61758 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC13.51□□□□□ -0.25
VBP1P61758 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VBP1P61758 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
VBP1P61758 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VBP1P61758 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VBP1P61758 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VBP1P61758 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VBP1P61758 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC13.51□□□□□ -0.25
VBP1P61758 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VBP1P61758 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VBP1P61758 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
VBP1P61758 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
VBP1P61758 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
VBP1P61758 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.51□□□□□ -0.25
VBP1P61758 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.51□□□□□ -0.25
VBP1P61758 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VBP1P61758 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VBP1P61758 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.51□□□□□ -0.25
VBP1P61758 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VBP1P61758 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VBP1P61758 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
VBP1P61758 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
VBP1P61758 IER3-202ENST00000376377 1350 ntBASIC13.51□□□□□ -0.25
VBP1P61758 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VBP1P61758 AC018665.1-201ENST00000622927 1362 ntBASIC13.51□□□□□ -0.25
VBP1P61758 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VBP1P61758 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
VBP1P61758 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VBP1P61758 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC13.51□□□□□ -0.25
VBP1P61758 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VBP1P61758 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC13.51□□□□□ -0.25
VBP1P61758 MOK-208ENST00000519058 917 ntTSL 2 BASIC13.51□□□□□ -0.25
VBP1P61758 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VBP1P61758 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VBP1P61758 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13.51□□□□□ -0.25
VBP1P61758 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC13.51□□□□□ -0.25
VBP1P61758 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.51□□□□□ -0.25
VBP1P61758 MIR4751-201ENST00000578027 74 ntBASIC13.51□□□□□ -0.25
VBP1P61758 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VBP1P61758 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.51□□□□□ -0.25
VBP1P61758 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
VBP1P61758 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VBP1P61758 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VBP1P61758 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
VBP1P61758 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
VBP1P61758 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC13.51□□□□□ -0.25
VBP1P61758 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VBP1P61758 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VBP1P61758 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
VBP1P61758 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VBP1P61758 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
VBP1P61758 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VBP1P61758 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
VBP1P61758 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC13.51□□□□□ -0.25
VBP1P61758 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
VBP1P61758 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
VBP1P61758 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VBP1P61758 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
VBP1P61758 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VBP1P61758 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC13.5□□□□□ -0.25
VBP1P61758 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VBP1P61758 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.5□□□□□ -0.25
VBP1P61758 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
VBP1P61758 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VBP1P61758 AP002414.3-201ENST00000589352 1468 ntBASIC13.5□□□□□ -0.25
VBP1P61758 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VBP1P61758 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VBP1P61758 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VBP1P61758 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VBP1P61758 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC13.5□□□□□ -0.25
VBP1P61758 HIST2H3DP1-201ENST00000401004 416 ntBASIC13.5□□□□□ -0.25
VBP1P61758 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.5□□□□□ -0.25
VBP1P61758 AC140658.5-201ENST00000438532 169 ntBASIC13.5□□□□□ -0.25
VBP1P61758 PRSS29P-201ENST00000440800 595 ntBASIC13.5□□□□□ -0.25
VBP1P61758 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC13.5□□□□□ -0.25
VBP1P61758 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.5□□□□□ -0.25
VBP1P61758 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC13.5□□□□□ -0.25
VBP1P61758 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.5□□□□□ -0.25
VBP1P61758 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.5□□□□□ -0.25
VBP1P61758 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.5□□□□□ -0.25
VBP1P61758 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.5□□□□□ -0.25
VBP1P61758 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.5□□□□□ -0.25
VBP1P61758 CLEC4GP1-201ENST00000596555 870 ntBASIC13.5□□□□□ -0.25
VBP1P61758 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.5□□□□□ -0.25
VBP1P61758 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
VBP1P61758 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC13.5□□□□□ -0.25
VBP1P61758 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
VBP1P61758 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
VBP1P61758 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VBP1P61758 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VBP1P61758 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC13.5□□□□□ -0.25
VBP1P61758 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.5□□□□□ -0.25
VBP1P61758 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VBP1P61758 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VBP1P61758 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.5□□□□□ -0.25
VBP1P61758 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms