Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 AC104640.1-201ENST00000562617 2109 ntBASIC14.86□□□□□ -0.03
SRP54P61011 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.86□□□□□ -0.03
SRP54P61011 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
SRP54P61011 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.86□□□□□ -0.03
SRP54P61011 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SRP54P61011 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
SRP54P61011 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SRP54P61011 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SRP54P61011 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SRP54P61011 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.86□□□□□ -0.03
SRP54P61011 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.86□□□□□ -0.03
SRP54P61011 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SRP54P61011 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
SRP54P61011 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.86□□□□□ -0.03
SRP54P61011 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SRP54P61011 AC006033.1-201ENST00000440505 426 ntBASIC14.86□□□□□ -0.03
SRP54P61011 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.86□□□□□ -0.03
SRP54P61011 AC099548.2-209ENST00000480264 625 ntBASIC14.86□□□□□ -0.03
SRP54P61011 MESTP3-201ENST00000503460 968 ntBASIC14.86□□□□□ -0.03
SRP54P61011 AC106820.3-201ENST00000561653 397 ntBASIC14.86□□□□□ -0.03
SRP54P61011 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.86□□□□□ -0.03
SRP54P61011 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.86□□□□□ -0.03
SRP54P61011 AC104982.3-201ENST00000581995 514 ntBASIC14.86□□□□□ -0.03
SRP54P61011 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SRP54P61011 AC073413.1-201ENST00000603927 732 ntBASIC14.86□□□□□ -0.03
SRP54P61011 AL022328.3-201ENST00000607943 679 ntBASIC14.86□□□□□ -0.03
SRP54P61011 ZACNP1-201ENST00000612259 710 ntBASIC14.86□□□□□ -0.03
SRP54P61011 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
SRP54P61011 AC005695.3-201ENST00000614522 232 ntBASIC14.86□□□□□ -0.03
SRP54P61011 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SRP54P61011 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.86□□□□□ -0.03
SRP54P61011 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.86□□□□□ -0.03
SRP54P61011 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.86□□□□□ -0.03
SRP54P61011 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.86□□□□□ -0.03
SRP54P61011 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
SRP54P61011 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SRP54P61011 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.86□□□□□ -0.03
SRP54P61011 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.86□□□□□ -0.03
SRP54P61011 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.86□□□□□ -0.03
SRP54P61011 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SRP54P61011 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
SRP54P61011 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SRP54P61011 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
SRP54P61011 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SRP54P61011 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SRP54P61011 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SRP54P61011 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SRP54P61011 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
SRP54P61011 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.86□□□□□ -0.03
SRP54P61011 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SRP54P61011 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SRP54P61011 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SRP54P61011 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.85□□□□□ -0.03
SRP54P61011 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRP54P61011 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.85□□□□□ -0.03
SRP54P61011 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRP54P61011 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRP54P61011 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.85□□□□□ -0.03
SRP54P61011 KRT8P4-201ENST00000509735 1454 ntBASIC14.85□□□□□ -0.03
SRP54P61011 AL122018.1-201ENST00000446607 2310 ntBASIC14.85□□□□□ -0.03
SRP54P61011 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRP54P61011 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRP54P61011 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRP54P61011 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.85□□□□□ -0.03
SRP54P61011 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.85□□□□□ -0.03
SRP54P61011 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRP54P61011 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SRP54P61011 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SRP54P61011 AC079178.1-201ENST00000420915 656 ntBASIC14.85□□□□□ -0.03
SRP54P61011 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.85□□□□□ -0.03
SRP54P61011 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.85□□□□□ -0.03
SRP54P61011 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.85□□□□□ -0.03
SRP54P61011 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.85□□□□□ -0.03
SRP54P61011 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.85□□□□□ -0.03
SRP54P61011 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.85□□□□□ -0.03
SRP54P61011 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.85□□□□□ -0.03
SRP54P61011 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRP54P61011 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
SRP54P61011 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRP54P61011 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRP54P61011 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.85□□□□□ -0.03
SRP54P61011 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SRP54P61011 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.85□□□□□ -0.03
SRP54P61011 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SRP54P61011 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
SRP54P61011 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.85□□□□□ -0.03
SRP54P61011 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRP54P61011 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SRP54P61011 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SRP54P61011 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRP54P61011 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.85□□□□□ -0.03
SRP54P61011 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
SRP54P61011 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SRP54P61011 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRP54P61011 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRP54P61011 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRP54P61011 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SRP54P61011 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRP54P61011 C18orf15-201ENST00000623680 2534 ntBASIC14.85□□□□□ -0.03
SRP54P61011 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms