Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PER3P56645 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
PER3P56645 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
PER3P56645 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
PER3P56645 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PER3P56645 MYO15B-237ENST00000642007 4893 ntBASIC14.03□□□□□ -0.16
PER3P56645 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
PER3P56645 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PER3P56645 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PER3P56645 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PER3P56645 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PER3P56645 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.03□□□□□ -0.16
PER3P56645 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PER3P56645 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
PER3P56645 Z93015.1-201ENST00000451718 390 ntBASIC14.03□□□□□ -0.16
PER3P56645 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.03□□□□□ -0.16
PER3P56645 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.03□□□□□ -0.16
PER3P56645 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.03□□□□□ -0.16
PER3P56645 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.03□□□□□ -0.16
PER3P56645 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC14.03□□□□□ -0.16
PER3P56645 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.03□□□□□ -0.16
PER3P56645 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PER3P56645 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PER3P56645 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PER3P56645 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PER3P56645 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PER3P56645 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.03□□□□□ -0.16
PER3P56645 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PER3P56645 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PER3P56645 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.03□□□□□ -0.16
PER3P56645 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PER3P56645 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PER3P56645 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
PER3P56645 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.03□□□□□ -0.16
PER3P56645 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PER3P56645 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PER3P56645 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PER3P56645 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PER3P56645 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PER3P56645 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.03□□□□□ -0.16
PER3P56645 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PER3P56645 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PER3P56645 AP003680.1-201ENST00000598970 3660 ntBASIC14.02□□□□□ -0.16
PER3P56645 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PER3P56645 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PER3P56645 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PER3P56645 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
PER3P56645 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
PER3P56645 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
PER3P56645 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PER3P56645 AC232323.1-201ENST00000540724 2099 ntBASIC14.02□□□□□ -0.16
PER3P56645 REXO1L5P-201ENST00000622260 2098 ntBASIC14.02□□□□□ -0.16
PER3P56645 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PER3P56645 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PER3P56645 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PER3P56645 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
PER3P56645 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PER3P56645 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.02□□□□□ -0.16
PER3P56645 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.16
PER3P56645 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.02□□□□□ -0.16
PER3P56645 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PER3P56645 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.02□□□□□ -0.16
PER3P56645 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PER3P56645 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PER3P56645 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
PER3P56645 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
PER3P56645 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC14.02□□□□□ -0.17
PER3P56645 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PER3P56645 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.02□□□□□ -0.17
PER3P56645 TOMM22P5-201ENST00000416399 439 ntBASIC14.02□□□□□ -0.17
PER3P56645 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.02□□□□□ -0.17
PER3P56645 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.02□□□□□ -0.17
PER3P56645 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.02□□□□□ -0.17
PER3P56645 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.02□□□□□ -0.17
PER3P56645 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.02□□□□□ -0.17
PER3P56645 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.02□□□□□ -0.17
PER3P56645 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PER3P56645 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.02□□□□□ -0.17
PER3P56645 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.02□□□□□ -0.17
PER3P56645 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.02□□□□□ -0.17
PER3P56645 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC14.02□□□□□ -0.17
PER3P56645 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.02□□□□□ -0.17
PER3P56645 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC14.02□□□□□ -0.17
PER3P56645 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.02□□□□□ -0.17
PER3P56645 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.02□□□□□ -0.17
PER3P56645 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.02□□□□□ -0.17
PER3P56645 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.02□□□□□ -0.17
PER3P56645 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
PER3P56645 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
PER3P56645 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PER3P56645 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PER3P56645 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PER3P56645 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PER3P56645 LINC00552-201ENST00000625151 2579 ntBASIC14.02□□□□□ -0.17
PER3P56645 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
PER3P56645 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PER3P56645 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
PER3P56645 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PER3P56645 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PER3P56645 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms