Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.24□□□□□ -0.13
CLK1P49759 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLK1P49759 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
CLK1P49759 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
CLK1P49759 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.24□□□□□ -0.13
CLK1P49759 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLK1P49759 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.24□□□□□ -0.13
CLK1P49759 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLK1P49759 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLK1P49759 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLK1P49759 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CLK1P49759 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.24□□□□□ -0.13
CLK1P49759 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.24□□□□□ -0.13
CLK1P49759 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLK1P49759 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CLK1P49759 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLK1P49759 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.24□□□□□ -0.13
CLK1P49759 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.24□□□□□ -0.13
CLK1P49759 BASP1P1-201ENST00000430708 665 ntBASIC14.24□□□□□ -0.13
CLK1P49759 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.24□□□□□ -0.13
CLK1P49759 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.24□□□□□ -0.13
CLK1P49759 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.24□□□□□ -0.13
CLK1P49759 RNA5SP421-201ENST00000516864 134 ntBASIC14.24□□□□□ -0.13
CLK1P49759 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CLK1P49759 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.24□□□□□ -0.13
CLK1P49759 AL512361.1-201ENST00000554200 418 ntBASIC14.24□□□□□ -0.13
CLK1P49759 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.24□□□□□ -0.13
CLK1P49759 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.24□□□□□ -0.13
CLK1P49759 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.24□□□□□ -0.13
CLK1P49759 AC106028.4-201ENST00000614509 607 ntBASIC14.24□□□□□ -0.13
CLK1P49759 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CLK1P49759 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.24□□□□□ -0.13
CLK1P49759 AL607033.1-201ENST00000623900 1599 ntBASIC14.24□□□□□ -0.13
CLK1P49759 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLK1P49759 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.24□□□□□ -0.13
CLK1P49759 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.24□□□□□ -0.13
CLK1P49759 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CLK1P49759 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CLK1P49759 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CLK1P49759 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CLK1P49759 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLK1P49759 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CLK1P49759 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CLK1P49759 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.24□□□□□ -0.13
CLK1P49759 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLK1P49759 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLK1P49759 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CLK1P49759 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLK1P49759 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.24□□□□□ -0.13
CLK1P49759 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CLK1P49759 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CLK1P49759 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CLK1P49759 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
CLK1P49759 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLK1P49759 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CLK1P49759 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.23□□□□□ -0.13
CLK1P49759 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLK1P49759 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLK1P49759 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLK1P49759 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLK1P49759 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLK1P49759 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLK1P49759 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
CLK1P49759 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CLK1P49759 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLK1P49759 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLK1P49759 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC14.23□□□□□ -0.13
CLK1P49759 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CLK1P49759 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CLK1P49759 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLK1P49759 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CLK1P49759 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLK1P49759 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLK1P49759 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLK1P49759 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLK1P49759 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC14.23□□□□□ -0.13
CLK1P49759 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLK1P49759 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CLK1P49759 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLK1P49759 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLK1P49759 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.23□□□□□ -0.13
CLK1P49759 TSSK5P-201ENST00000423978 907 ntBASIC14.23□□□□□ -0.13
CLK1P49759 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.23□□□□□ -0.13
CLK1P49759 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.23□□□□□ -0.13
CLK1P49759 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.23□□□□□ -0.13
CLK1P49759 AL512638.1-201ENST00000457493 794 ntBASIC14.23□□□□□ -0.13
CLK1P49759 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.23□□□□□ -0.13
CLK1P49759 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.23□□□□□ -0.13
CLK1P49759 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.23□□□□□ -0.13
CLK1P49759 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.23□□□□□ -0.13
CLK1P49759 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.23□□□□□ -0.13
CLK1P49759 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.23□□□□□ -0.13
CLK1P49759 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.23□□□□□ -0.13
CLK1P49759 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.23□□□□□ -0.13
CLK1P49759 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.23□□□□□ -0.13
CLK1P49759 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLK1P49759 AL844908.2-201ENST00000609461 460 ntBASIC14.23□□□□□ -0.13
CLK1P49759 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CLK1P49759 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLK1P49759 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms