Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BRCC3P46736 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BRCC3P46736 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.89■□□□□ 0.13
BRCC3P46736 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
BRCC3P46736 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
BRCC3P46736 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BRCC3P46736 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC15.89■□□□□ 0.13
BRCC3P46736 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
BRCC3P46736 CRCP-204ENST00000398684 492 ntTSL 2 BASIC15.89■□□□□ 0.13
BRCC3P46736 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC15.89■□□□□ 0.13
BRCC3P46736 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC15.89■□□□□ 0.13
BRCC3P46736 SPTLC1P5-201ENST00000450718 252 ntBASIC15.89■□□□□ 0.13
BRCC3P46736 TUBB8P8-201ENST00000458717 1058 ntBASIC15.89■□□□□ 0.13
BRCC3P46736 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC15.89■□□□□ 0.13
BRCC3P46736 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
BRCC3P46736 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.89■□□□□ 0.13
BRCC3P46736 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.89■□□□□ 0.13
BRCC3P46736 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC15.89■□□□□ 0.13
BRCC3P46736 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC15.89■□□□□ 0.13
BRCC3P46736 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC15.89■□□□□ 0.13
BRCC3P46736 AC132192.2-201ENST00000596206 1147 ntBASIC15.89■□□□□ 0.13
BRCC3P46736 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC15.89■□□□□ 0.13
BRCC3P46736 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
BRCC3P46736 CICP23-201ENST00000605013 2741 ntBASIC15.89■□□□□ 0.13
BRCC3P46736 ZBED1P1-201ENST00000502364 1930 ntBASIC15.89■□□□□ 0.13
BRCC3P46736 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.89■□□□□ 0.13
BRCC3P46736 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BRCC3P46736 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
BRCC3P46736 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BRCC3P46736 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
BRCC3P46736 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
BRCC3P46736 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
BRCC3P46736 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
BRCC3P46736 AC007292.2-201ENST00000593524 1812 ntBASIC15.89■□□□□ 0.13
BRCC3P46736 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.89■□□□□ 0.13
BRCC3P46736 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BRCC3P46736 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
BRCC3P46736 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BRCC3P46736 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
BRCC3P46736 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BRCC3P46736 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
BRCC3P46736 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BRCC3P46736 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.88■□□□□ 0.13
BRCC3P46736 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
BRCC3P46736 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.88■□□□□ 0.13
BRCC3P46736 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BRCC3P46736 AC022532.1-201ENST00000624563 1728 ntBASIC15.88■□□□□ 0.13
BRCC3P46736 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
BRCC3P46736 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.88■□□□□ 0.13
BRCC3P46736 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.88■□□□□ 0.13
BRCC3P46736 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
BRCC3P46736 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
BRCC3P46736 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.88■□□□□ 0.13
BRCC3P46736 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BRCC3P46736 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BRCC3P46736 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
BRCC3P46736 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BRCC3P46736 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BRCC3P46736 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BRCC3P46736 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BRCC3P46736 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BRCC3P46736 AC006486.2-201ENST00000624246 2199 ntBASIC15.88■□□□□ 0.13
BRCC3P46736 NPPA-201ENST00000376476 728 ntTSL 3 BASIC15.88■□□□□ 0.13
BRCC3P46736 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BRCC3P46736 KRTAP19-9P-201ENST00000421795 191 ntBASIC15.88■□□□□ 0.13
BRCC3P46736 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.88■□□□□ 0.13
BRCC3P46736 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
BRCC3P46736 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
BRCC3P46736 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BRCC3P46736 RPL18P13-201ENST00000478088 569 ntBASIC15.88■□□□□ 0.13
BRCC3P46736 TSACC-208ENST00000481479 741 ntTSL 2 BASIC15.88■□□□□ 0.13
BRCC3P46736 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.88■□□□□ 0.13
BRCC3P46736 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC15.88■□□□□ 0.13
BRCC3P46736 GCOM2-201ENST00000509133 1104 ntBASIC15.88■□□□□ 0.13
BRCC3P46736 AC022217.1-201ENST00000521069 738 ntBASIC15.88■□□□□ 0.13
BRCC3P46736 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC15.88■□□□□ 0.13
BRCC3P46736 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC15.88■□□□□ 0.13
BRCC3P46736 AC131206.1-201ENST00000538078 1211 ntBASIC15.88■□□□□ 0.13
BRCC3P46736 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
BRCC3P46736 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.88■□□□□ 0.13
BRCC3P46736 RN7SL163P-201ENST00000583100 276 ntBASIC15.88■□□□□ 0.13
BRCC3P46736 AC005324.6-201ENST00000587972 613 ntBASIC15.88■□□□□ 0.13
BRCC3P46736 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
BRCC3P46736 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC15.88■□□□□ 0.13
BRCC3P46736 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC15.88■□□□□ 0.13
BRCC3P46736 AC068587.8-201ENST00000641239 219 ntBASIC15.88■□□□□ 0.13
BRCC3P46736 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
BRCC3P46736 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
BRCC3P46736 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
BRCC3P46736 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
BRCC3P46736 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.88■□□□□ 0.13
BRCC3P46736 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
BRCC3P46736 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
BRCC3P46736 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.88■□□□□ 0.13
BRCC3P46736 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
BRCC3P46736 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
BRCC3P46736 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.88■□□□□ 0.13
BRCC3P46736 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BRCC3P46736 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
BRCC3P46736 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms