Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.83■□□□□ 0.12
GRIK1P39086 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.83■□□□□ 0.12
GRIK1P39086 AP000593.2-201ENST00000542775 1433 ntBASIC15.83■□□□□ 0.12
GRIK1P39086 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
GRIK1P39086 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
GRIK1P39086 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
GRIK1P39086 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
GRIK1P39086 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
GRIK1P39086 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.83■□□□□ 0.12
GRIK1P39086 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
GRIK1P39086 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
GRIK1P39086 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
GRIK1P39086 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
GRIK1P39086 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
GRIK1P39086 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.82■□□□□ 0.12
GRIK1P39086 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
GRIK1P39086 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.82■□□□□ 0.12
GRIK1P39086 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
GRIK1P39086 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
GRIK1P39086 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
GRIK1P39086 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.82■□□□□ 0.12
GRIK1P39086 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
GRIK1P39086 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
GRIK1P39086 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.82■□□□□ 0.12
GRIK1P39086 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
GRIK1P39086 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GRIK1P39086 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
GRIK1P39086 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
GRIK1P39086 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
GRIK1P39086 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.82■□□□□ 0.12
GRIK1P39086 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
GRIK1P39086 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
GRIK1P39086 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GRIK1P39086 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
GRIK1P39086 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GRIK1P39086 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
GRIK1P39086 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
GRIK1P39086 AL136309.1-201ENST00000403917 691 ntBASIC15.82■□□□□ 0.12
GRIK1P39086 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
GRIK1P39086 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.82■□□□□ 0.12
GRIK1P39086 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
GRIK1P39086 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GRIK1P39086 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.82■□□□□ 0.12
GRIK1P39086 FAM8A2P-201ENST00000528813 1142 ntBASIC15.82■□□□□ 0.12
GRIK1P39086 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.82■□□□□ 0.12
GRIK1P39086 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.82■□□□□ 0.12
GRIK1P39086 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC15.82■□□□□ 0.12
GRIK1P39086 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
GRIK1P39086 AL118558.3-201ENST00000607414 1079 ntBASIC15.82■□□□□ 0.12
GRIK1P39086 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.82■□□□□ 0.12
GRIK1P39086 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.82■□□□□ 0.12
GRIK1P39086 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GRIK1P39086 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
GRIK1P39086 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
GRIK1P39086 AC011840.2-201ENST00000563063 1520 ntBASIC15.82■□□□□ 0.12
GRIK1P39086 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GRIK1P39086 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.82■□□□□ 0.12
GRIK1P39086 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
GRIK1P39086 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
GRIK1P39086 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.82■□□□□ 0.12
GRIK1P39086 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
GRIK1P39086 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
GRIK1P39086 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.82■□□□□ 0.12
GRIK1P39086 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
GRIK1P39086 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.82■□□□□ 0.12
GRIK1P39086 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
GRIK1P39086 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
GRIK1P39086 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
GRIK1P39086 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
GRIK1P39086 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
GRIK1P39086 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GRIK1P39086 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.81■□□□□ 0.12
GRIK1P39086 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GRIK1P39086 AC092384.3-202ENST00000564646 2873 ntBASIC15.81■□□□□ 0.12
GRIK1P39086 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GRIK1P39086 AP002414.2-201ENST00000591780 3365 ntBASIC15.81■□□□□ 0.12
GRIK1P39086 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GRIK1P39086 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.81■□□□□ 0.12
GRIK1P39086 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
GRIK1P39086 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GRIK1P39086 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GRIK1P39086 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GRIK1P39086 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GRIK1P39086 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GRIK1P39086 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GRIK1P39086 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GRIK1P39086 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.81■□□□□ 0.12
GRIK1P39086 RN7SKP175-201ENST00000408472 289 ntBASIC15.81■□□□□ 0.12
GRIK1P39086 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GRIK1P39086 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GRIK1P39086 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
GRIK1P39086 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.81■□□□□ 0.12
GRIK1P39086 CHMP1AP1-201ENST00000445563 662 ntBASIC15.81■□□□□ 0.12
GRIK1P39086 HIST2H2BB-201ENST00000449108 381 ntBASIC15.81■□□□□ 0.12
GRIK1P39086 AL591846.1-201ENST00000451736 433 ntBASIC15.81■□□□□ 0.12
GRIK1P39086 AC104306.2-201ENST00000451877 341 ntBASIC15.81■□□□□ 0.12
GRIK1P39086 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GRIK1P39086 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.81■□□□□ 0.12
GRIK1P39086 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC15.81■□□□□ 0.12
GRIK1P39086 ZBED1P1-201ENST00000502364 1930 ntBASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms