Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 AL391280.1-201ENST00000506969 1062 ntBASIC18.05■□□□□ 0.48
CHMLP26374 GCOM2-201ENST00000509133 1104 ntBASIC18.05■□□□□ 0.48
CHMLP26374 NEU3-203ENST00000529024 581 ntTSL 3 BASIC18.05■□□□□ 0.48
CHMLP26374 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CHMLP26374 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC18.05■□□□□ 0.48
CHMLP26374 AL596325.1-201ENST00000563991 1082 ntBASIC18.05■□□□□ 0.48
CHMLP26374 ETV2-208ENST00000621247 941 ntTSL 5 BASIC18.05■□□□□ 0.48
CHMLP26374 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMLP26374 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CHMLP26374 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMLP26374 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CHMLP26374 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMLP26374 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMLP26374 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMLP26374 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMLP26374 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMLP26374 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMLP26374 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMLP26374 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMLP26374 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHMLP26374 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC18.05■□□□□ 0.48
CHMLP26374 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHMLP26374 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMLP26374 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMLP26374 AC152010.1-201ENST00000415779 2006 ntBASIC18.05■□□□□ 0.48
CHMLP26374 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC18.04■□□□□ 0.48
CHMLP26374 AL136172.1-201ENST00000598590 1394 ntBASIC18.04■□□□□ 0.48
CHMLP26374 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC18.04■□□□□ 0.48
CHMLP26374 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC18.04■□□□□ 0.48
CHMLP26374 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC18.04■□□□□ 0.48
CHMLP26374 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMLP26374 MRPL37P1-201ENST00000592451 1337 ntBASIC18.04■□□□□ 0.48
CHMLP26374 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMLP26374 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMLP26374 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMLP26374 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMLP26374 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CHMLP26374 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHMLP26374 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMLP26374 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMLP26374 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC18.04■□□□□ 0.48
CHMLP26374 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CHMLP26374 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHMLP26374 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC18.04■□□□□ 0.48
CHMLP26374 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMLP26374 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMLP26374 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHMLP26374 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.04■□□□□ 0.48
CHMLP26374 AC092933.1-201ENST00000393644 945 ntBASIC18.04■□□□□ 0.48
CHMLP26374 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHMLP26374 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.04■□□□□ 0.48
CHMLP26374 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.04■□□□□ 0.48
CHMLP26374 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC18.04■□□□□ 0.48
CHMLP26374 INE1-201ENST00000456273 945 ntBASIC18.04■□□□□ 0.48
CHMLP26374 RN7SL692P-201ENST00000464677 288 ntBASIC18.04■□□□□ 0.48
CHMLP26374 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMLP26374 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.04■□□□□ 0.48
CHMLP26374 AC025279.2-201ENST00000569730 653 ntBASIC18.04■□□□□ 0.48
CHMLP26374 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
CHMLP26374 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC18.04■□□□□ 0.48
CHMLP26374 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHMLP26374 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMLP26374 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMLP26374 ABR-228ENST00000574437 3196 ntTSL 5 BASIC18.04■□□□□ 0.48
CHMLP26374 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC18.04■□□□□ 0.48
CHMLP26374 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMLP26374 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHMLP26374 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMLP26374 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHMLP26374 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMLP26374 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMLP26374 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMLP26374 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMLP26374 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMLP26374 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMLP26374 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHMLP26374 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CHMLP26374 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC18.03■□□□□ 0.48
CHMLP26374 OS9-204ENST00000389146 2091 ntTSL 2 BASIC18.03■□□□□ 0.48
CHMLP26374 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC18.03■□□□□ 0.48
CHMLP26374 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
CHMLP26374 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CHMLP26374 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHMLP26374 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHMLP26374 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CHMLP26374 AC005229.1-201ENST00000392885 409 ntBASIC18.03■□□□□ 0.48
CHMLP26374 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHMLP26374 TMEM14DP-201ENST00000422205 345 ntBASIC18.03■□□□□ 0.48
CHMLP26374 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHMLP26374 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.03■□□□□ 0.48
CHMLP26374 AC007389.4-201ENST00000454674 793 ntBASIC18.03■□□□□ 0.48
CHMLP26374 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC18.03■□□□□ 0.48
CHMLP26374 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC18.03■□□□□ 0.48
CHMLP26374 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.03■□□□□ 0.48
CHMLP26374 SLC25A47P1-201ENST00000531577 414 ntBASIC18.03■□□□□ 0.48
CHMLP26374 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHMLP26374 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CHMLP26374 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
CHMLP26374 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
CHMLP26374 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms