Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN3P26045 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN3P26045 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.31■□□□□ 0.04
PTPN3P26045 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN3P26045 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PTPN3P26045 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
PTPN3P26045 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN3P26045 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PTPN3P26045 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN3P26045 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PTPN3P26045 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN3P26045 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN3P26045 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN3P26045 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PTPN3P26045 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PTPN3P26045 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.31■□□□□ 0.04
PTPN3P26045 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN3P26045 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN3P26045 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.31■□□□□ 0.04
PTPN3P26045 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
PTPN3P26045 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.31■□□□□ 0.04
PTPN3P26045 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.31■□□□□ 0.04
PTPN3P26045 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.31■□□□□ 0.04
PTPN3P26045 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.31■□□□□ 0.04
PTPN3P26045 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.31■□□□□ 0.04
PTPN3P26045 AC027307.3-201ENST00000594262 1100 ntBASIC15.31■□□□□ 0.04
PTPN3P26045 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN3P26045 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN3P26045 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PTPN3P26045 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN3P26045 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.31■□□□□ 0.04
PTPN3P26045 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN3P26045 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN3P26045 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN3P26045 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN3P26045 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN3P26045 SALL4P5-201ENST00000419001 1760 ntBASIC15.31■□□□□ 0.04
PTPN3P26045 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN3P26045 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PTPN3P26045 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN3P26045 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.31■□□□□ 0.04
PTPN3P26045 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PTPN3P26045 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.31■□□□□ 0.04
PTPN3P26045 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PTPN3P26045 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN3P26045 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN3P26045 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN3P26045 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN3P26045 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
PTPN3P26045 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN3P26045 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PTPN3P26045 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.31■□□□□ 0.04
PTPN3P26045 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
PTPN3P26045 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.31■□□□□ 0.04
PTPN3P26045 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN3P26045 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.3■□□□□ 0.04
PTPN3P26045 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN3P26045 SNX18-202ENST00000343017 3140 ntBASIC15.3■□□□□ 0.04
PTPN3P26045 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN3P26045 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN3P26045 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN3P26045 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN3P26045 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN3P26045 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN3P26045 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN3P26045 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.3■□□□□ 0.04
PTPN3P26045 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.3■□□□□ 0.04
PTPN3P26045 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN3P26045 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.3■□□□□ 0.04
PTPN3P26045 TLE1P1-201ENST00000422965 589 ntBASIC15.3■□□□□ 0.04
PTPN3P26045 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.3■□□□□ 0.04
PTPN3P26045 AC007969.1-201ENST00000433675 447 ntBASIC15.3■□□□□ 0.04
PTPN3P26045 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PTPN3P26045 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.3■□□□□ 0.04
PTPN3P26045 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.3■□□□□ 0.04
PTPN3P26045 AC106760.1-201ENST00000508690 800 ntBASIC15.3■□□□□ 0.04
PTPN3P26045 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN3P26045 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN3P26045 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.3■□□□□ 0.04
PTPN3P26045 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.3■□□□□ 0.04
PTPN3P26045 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
PTPN3P26045 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.3■□□□□ 0.04
PTPN3P26045 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
PTPN3P26045 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.3■□□□□ 0.04
PTPN3P26045 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN3P26045 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN3P26045 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PTPN3P26045 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.3■□□□□ 0.04
PTPN3P26045 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.3■□□□□ 0.04
PTPN3P26045 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN3P26045 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PTPN3P26045 AL138709.1-201ENST00000614840 1693 ntBASIC15.3■□□□□ 0.04
PTPN3P26045 AC015656.1-201ENST00000624209 3578 ntBASIC15.3■□□□□ 0.04
PTPN3P26045 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
PTPN3P26045 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN3P26045 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.3■□□□□ 0.04
PTPN3P26045 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN3P26045 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.3■□□□□ 0.04
PTPN3P26045 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.3■□□□□ 0.04
PTPN3P26045 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms