Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHMP24386 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHMP24386 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHMP24386 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CHMP24386 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.12□□□□□ -0.15
CHMP24386 BEND3P1-201ENST00000421591 1944 ntBASIC14.12□□□□□ -0.15
CHMP24386 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHMP24386 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.12□□□□□ -0.15
CHMP24386 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.12□□□□□ -0.15
CHMP24386 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHMP24386 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHMP24386 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHMP24386 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CHMP24386 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.12□□□□□ -0.15
CHMP24386 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.12□□□□□ -0.15
CHMP24386 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.12□□□□□ -0.15
CHMP24386 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.12□□□□□ -0.15
CHMP24386 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.12□□□□□ -0.15
CHMP24386 AC015910.1-201ENST00000579400 975 ntBASIC14.12□□□□□ -0.15
CHMP24386 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CHMP24386 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHMP24386 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHMP24386 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHMP24386 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHMP24386 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHMP24386 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CHMP24386 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CHMP24386 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CHMP24386 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.12□□□□□ -0.15
CHMP24386 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHMP24386 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHMP24386 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHMP24386 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHMP24386 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHMP24386 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CHMP24386 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CHMP24386 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CHMP24386 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHMP24386 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHMP24386 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.11□□□□□ -0.15
CHMP24386 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHMP24386 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHMP24386 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHMP24386 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CHMP24386 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.11□□□□□ -0.15
CHMP24386 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHMP24386 AC098850.1-201ENST00000419919 790 ntBASIC14.11□□□□□ -0.15
CHMP24386 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CHMP24386 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.11□□□□□ -0.15
CHMP24386 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CHMP24386 RN7SL752P-201ENST00000463779 287 ntBASIC14.11□□□□□ -0.15
CHMP24386 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.11□□□□□ -0.15
CHMP24386 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.11□□□□□ -0.15
CHMP24386 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.11□□□□□ -0.15
CHMP24386 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CHMP24386 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.11□□□□□ -0.15
CHMP24386 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.11□□□□□ -0.15
CHMP24386 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CHMP24386 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.11□□□□□ -0.15
CHMP24386 BRI3BPP1-201ENST00000594224 787 ntBASIC14.11□□□□□ -0.15
CHMP24386 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.11□□□□□ -0.15
CHMP24386 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.11□□□□□ -0.15
CHMP24386 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.11□□□□□ -0.15
CHMP24386 MIR8072-201ENST00000614241 80 ntBASIC14.11□□□□□ -0.15
CHMP24386 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CHMP24386 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.11□□□□□ -0.15
CHMP24386 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.11□□□□□ -0.15
CHMP24386 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHMP24386 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CHMP24386 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.11□□□□□ -0.15
CHMP24386 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHMP24386 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHMP24386 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CHMP24386 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.11□□□□□ -0.15
CHMP24386 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CHMP24386 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHMP24386 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHMP24386 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHMP24386 AP001267.2-201ENST00000532619 2086 ntBASIC14.11□□□□□ -0.15
CHMP24386 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHMP24386 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CHMP24386 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
CHMP24386 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHMP24386 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHMP24386 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHMP24386 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.11□□□□□ -0.15
CHMP24386 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CHMP24386 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CHMP24386 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CHMP24386 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.1□□□□□ -0.15
CHMP24386 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CHMP24386 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CHMP24386 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CHMP24386 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
CHMP24386 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
CHMP24386 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CHMP24386 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.1□□□□□ -0.15
CHMP24386 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CHMP24386 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CHMP24386 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms