Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VAMP1P23763 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
VAMP1P23763 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VAMP1P23763 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VAMP1P23763 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.79□□□□□ -0.36
VAMP1P23763 PPT1-213ENST00000641319 2388 ntBASIC12.79□□□□□ -0.36
VAMP1P23763 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VAMP1P23763 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VAMP1P23763 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VAMP1P23763 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VAMP1P23763 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VAMP1P23763 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
VAMP1P23763 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VAMP1P23763 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.79□□□□□ -0.36
VAMP1P23763 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VAMP1P23763 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VAMP1P23763 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC12.79□□□□□ -0.36
VAMP1P23763 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC12.79□□□□□ -0.36
VAMP1P23763 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VAMP1P23763 PP14571-201ENST00000404327 934 ntTSL 2 BASIC12.79□□□□□ -0.36
VAMP1P23763 AZGP1P1-201ENST00000411909 902 ntBASIC12.79□□□□□ -0.36
VAMP1P23763 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC12.79□□□□□ -0.36
VAMP1P23763 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC12.79□□□□□ -0.36
VAMP1P23763 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC12.79□□□□□ -0.36
VAMP1P23763 AF186996.4-201ENST00000467186 377 ntBASIC12.79□□□□□ -0.36
VAMP1P23763 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VAMP1P23763 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC12.79□□□□□ -0.36
VAMP1P23763 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC12.79□□□□□ -0.36
VAMP1P23763 PRR29-207ENST00000580752 458 ntTSL 3 BASIC12.79□□□□□ -0.36
VAMP1P23763 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC12.79□□□□□ -0.36
VAMP1P23763 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
VAMP1P23763 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC12.79□□□□□ -0.36
VAMP1P23763 SPIB-207ENST00000597855 564 ntTSL 4 BASIC12.79□□□□□ -0.36
VAMP1P23763 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.79□□□□□ -0.36
VAMP1P23763 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VAMP1P23763 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VAMP1P23763 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VAMP1P23763 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VAMP1P23763 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VAMP1P23763 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.79□□□□□ -0.36
VAMP1P23763 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VAMP1P23763 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC12.79□□□□□ -0.36
VAMP1P23763 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VAMP1P23763 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VAMP1P23763 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VAMP1P23763 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
VAMP1P23763 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.79□□□□□ -0.36
VAMP1P23763 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC12.79□□□□□ -0.36
VAMP1P23763 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC12.79□□□□□ -0.36
VAMP1P23763 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC12.79□□□□□ -0.36
VAMP1P23763 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VAMP1P23763 AC130686.1-201ENST00000622936 2466 ntBASIC12.79□□□□□ -0.36
VAMP1P23763 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VAMP1P23763 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC12.79□□□□□ -0.36
VAMP1P23763 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
VAMP1P23763 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
VAMP1P23763 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VAMP1P23763 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.79□□□□□ -0.36
VAMP1P23763 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.78□□□□□ -0.36
VAMP1P23763 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VAMP1P23763 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
VAMP1P23763 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VAMP1P23763 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
VAMP1P23763 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
VAMP1P23763 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VAMP1P23763 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
VAMP1P23763 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.78□□□□□ -0.36
VAMP1P23763 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.78□□□□□ -0.36
VAMP1P23763 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.78□□□□□ -0.36
VAMP1P23763 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
VAMP1P23763 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
VAMP1P23763 AC004990.1-202ENST00000454234 1965 ntTSL 2 BASIC12.78□□□□□ -0.36
VAMP1P23763 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
VAMP1P23763 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.78□□□□□ -0.36
VAMP1P23763 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VAMP1P23763 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VAMP1P23763 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VAMP1P23763 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
VAMP1P23763 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
VAMP1P23763 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VAMP1P23763 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC12.78□□□□□ -0.36
VAMP1P23763 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VAMP1P23763 CBR1-202ENST00000399191 838 ntTSL 3 BASIC12.78□□□□□ -0.36
VAMP1P23763 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC12.78□□□□□ -0.36
VAMP1P23763 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC12.78□□□□□ -0.36
VAMP1P23763 HCG4B-203ENST00000450128 991 ntBASIC12.78□□□□□ -0.36
VAMP1P23763 TPT1P11-201ENST00000458482 498 ntBASIC12.78□□□□□ -0.36
VAMP1P23763 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC12.78□□□□□ -0.36
VAMP1P23763 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
VAMP1P23763 UNC93B6-202ENST00000528242 690 ntBASIC12.78□□□□□ -0.36
VAMP1P23763 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC12.78□□□□□ -0.36
VAMP1P23763 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC12.78□□□□□ -0.36
VAMP1P23763 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC12.78□□□□□ -0.36
VAMP1P23763 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC12.78□□□□□ -0.36
VAMP1P23763 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
VAMP1P23763 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC12.78□□□□□ -0.36
VAMP1P23763 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
VAMP1P23763 IFNL4P1-201ENST00000607083 540 ntBASIC12.78□□□□□ -0.36
VAMP1P23763 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC12.78□□□□□ -0.36
VAMP1P23763 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms