Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CD53P19397 C3orf20-202ENST00000412910 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD53P19397 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.75□□□□□ -0.21
CD53P19397 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD53P19397 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD53P19397 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CD53P19397 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CD53P19397 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD53P19397 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD53P19397 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
CD53P19397 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CD53P19397 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
CD53P19397 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.74□□□□□ -0.21
CD53P19397 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD53P19397 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD53P19397 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.74□□□□□ -0.21
CD53P19397 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.74□□□□□ -0.21
CD53P19397 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.74□□□□□ -0.21
CD53P19397 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD53P19397 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CD53P19397 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.74□□□□□ -0.21
CD53P19397 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD53P19397 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.74□□□□□ -0.21
CD53P19397 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.74□□□□□ -0.21
CD53P19397 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.74□□□□□ -0.21
CD53P19397 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD53P19397 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.74□□□□□ -0.21
CD53P19397 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CD53P19397 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CD53P19397 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.74□□□□□ -0.21
CD53P19397 CROCCP4-201ENST00000457096 498 ntBASIC13.74□□□□□ -0.21
CD53P19397 AC104989.1-201ENST00000519711 778 ntBASIC13.74□□□□□ -0.21
CD53P19397 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CD53P19397 TIMM17BP1-201ENST00000545713 516 ntBASIC13.74□□□□□ -0.21
CD53P19397 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CD53P19397 AC074044.1-201ENST00000609673 707 ntBASIC13.74□□□□□ -0.21
CD53P19397 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.74□□□□□ -0.21
CD53P19397 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD53P19397 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CD53P19397 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD53P19397 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CD53P19397 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD53P19397 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD53P19397 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.74□□□□□ -0.21
CD53P19397 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CD53P19397 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.74□□□□□ -0.21
CD53P19397 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.74□□□□□ -0.21
CD53P19397 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CD53P19397 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.74□□□□□ -0.21
CD53P19397 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CD53P19397 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.74□□□□□ -0.21
CD53P19397 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CD53P19397 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CD53P19397 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD53P19397 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CD53P19397 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CD53P19397 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CD53P19397 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD53P19397 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CD53P19397 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CD53P19397 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD53P19397 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CD53P19397 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD53P19397 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CD53P19397 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.73□□□□□ -0.21
CD53P19397 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.73□□□□□ -0.21
CD53P19397 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD53P19397 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
CD53P19397 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.73□□□□□ -0.21
CD53P19397 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CD53P19397 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.73□□□□□ -0.21
CD53P19397 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CD53P19397 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.73□□□□□ -0.21
CD53P19397 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.73□□□□□ -0.21
CD53P19397 FAM8A2P-201ENST00000528813 1142 ntBASIC13.73□□□□□ -0.21
CD53P19397 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.73□□□□□ -0.21
CD53P19397 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC13.73□□□□□ -0.21
CD53P19397 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD53P19397 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CD53P19397 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD53P19397 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.73□□□□□ -0.21
CD53P19397 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.73□□□□□ -0.21
CD53P19397 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD53P19397 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.73□□□□□ -0.21
CD53P19397 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD53P19397 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CD53P19397 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CD53P19397 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD53P19397 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD53P19397 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.73□□□□□ -0.21
CD53P19397 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD53P19397 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CD53P19397 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CD53P19397 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD53P19397 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD53P19397 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD53P19397 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD53P19397 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.72□□□□□ -0.21
CD53P19397 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD53P19397 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms