Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ERCC2P18074 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.46■□□□□ 0.07
ERCC2P18074 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.46■□□□□ 0.07
ERCC2P18074 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.46■□□□□ 0.07
ERCC2P18074 AC007969.1-201ENST00000433675 447 ntBASIC15.46■□□□□ 0.07
ERCC2P18074 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ERCC2P18074 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.46■□□□□ 0.07
ERCC2P18074 GAPDHP21-201ENST00000450301 1010 ntBASIC15.46■□□□□ 0.07
ERCC2P18074 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ERCC2P18074 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
ERCC2P18074 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.46■□□□□ 0.07
ERCC2P18074 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.46■□□□□ 0.07
ERCC2P18074 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.46■□□□□ 0.07
ERCC2P18074 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ERCC2P18074 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.46■□□□□ 0.07
ERCC2P18074 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ERCC2P18074 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.46■□□□□ 0.07
ERCC2P18074 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.46■□□□□ 0.07
ERCC2P18074 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ERCC2P18074 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
ERCC2P18074 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.46■□□□□ 0.07
ERCC2P18074 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
ERCC2P18074 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ERCC2P18074 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ERCC2P18074 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
ERCC2P18074 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ERCC2P18074 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ERCC2P18074 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
ERCC2P18074 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
ERCC2P18074 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
ERCC2P18074 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
ERCC2P18074 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
ERCC2P18074 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
ERCC2P18074 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
ERCC2P18074 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ERCC2P18074 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.45■□□□□ 0.06
ERCC2P18074 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
ERCC2P18074 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ERCC2P18074 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ERCC2P18074 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
ERCC2P18074 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
ERCC2P18074 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ERCC2P18074 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.45■□□□□ 0.06
ERCC2P18074 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.45■□□□□ 0.06
ERCC2P18074 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.45■□□□□ 0.06
ERCC2P18074 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ERCC2P18074 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ERCC2P18074 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
ERCC2P18074 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ERCC2P18074 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.45■□□□□ 0.06
ERCC2P18074 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.45■□□□□ 0.06
ERCC2P18074 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ERCC2P18074 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.45■□□□□ 0.06
ERCC2P18074 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.45■□□□□ 0.06
ERCC2P18074 C2orf27AP3-201ENST00000434123 579 ntBASIC15.45■□□□□ 0.06
ERCC2P18074 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.45■□□□□ 0.06
ERCC2P18074 MESTP3-201ENST00000503460 968 ntBASIC15.45■□□□□ 0.06
ERCC2P18074 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
ERCC2P18074 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.45■□□□□ 0.06
ERCC2P18074 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ERCC2P18074 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ERCC2P18074 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.45■□□□□ 0.06
ERCC2P18074 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.45■□□□□ 0.06
ERCC2P18074 AC244669.2-201ENST00000612320 853 ntBASIC15.45■□□□□ 0.06
ERCC2P18074 AL354718.3-201ENST00000616414 581 ntBASIC15.45■□□□□ 0.06
ERCC2P18074 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
ERCC2P18074 CR382287.1-201ENST00000623954 586 ntBASIC15.45■□□□□ 0.06
ERCC2P18074 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ERCC2P18074 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ERCC2P18074 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.45■□□□□ 0.06
ERCC2P18074 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
ERCC2P18074 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ERCC2P18074 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ERCC2P18074 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ERCC2P18074 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.45■□□□□ 0.06
ERCC2P18074 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ERCC2P18074 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ERCC2P18074 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ERCC2P18074 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.45■□□□□ 0.06
ERCC2P18074 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ERCC2P18074 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ERCC2P18074 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
ERCC2P18074 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
ERCC2P18074 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ERCC2P18074 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ERCC2P18074 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ERCC2P18074 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.44■□□□□ 0.06
ERCC2P18074 AL138725.1-201ENST00000407347 1314 ntBASIC15.44■□□□□ 0.06
ERCC2P18074 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ERCC2P18074 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
ERCC2P18074 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ERCC2P18074 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ERCC2P18074 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ERCC2P18074 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ERCC2P18074 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
ERCC2P18074 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ERCC2P18074 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
ERCC2P18074 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ERCC2P18074 TPM3P8-201ENST00000330554 643 ntBASIC15.44■□□□□ 0.06
ERCC2P18074 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms