Protein–RNA interactions for Protein: P0DN86

CGB3, Choriogonadotropin subunit beta 3, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB3P0DN86 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CGB3P0DN86 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC12.29□□□□□ -0.44
CGB3P0DN86 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CGB3P0DN86 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CGB3P0DN86 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
CGB3P0DN86 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CGB3P0DN86 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CGB3P0DN86 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
CGB3P0DN86 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CGB3P0DN86 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.29□□□□□ -0.44
CGB3P0DN86 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CGB3P0DN86 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CGB3P0DN86 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CGB3P0DN86 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.29□□□□□ -0.44
CGB3P0DN86 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CGB3P0DN86 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CGB3P0DN86 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CGB3P0DN86 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CGB3P0DN86 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CGB3P0DN86 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CGB3P0DN86 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CGB3P0DN86 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC12.29□□□□□ -0.44
CGB3P0DN86 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC12.29□□□□□ -0.44
CGB3P0DN86 LHX6-205ENST00000464484 666 ntTSL 2 BASIC12.29□□□□□ -0.44
CGB3P0DN86 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC12.29□□□□□ -0.44
CGB3P0DN86 AL391280.1-201ENST00000506969 1062 ntBASIC12.29□□□□□ -0.44
CGB3P0DN86 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC12.29□□□□□ -0.44
CGB3P0DN86 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CGB3P0DN86 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC12.29□□□□□ -0.44
CGB3P0DN86 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC12.29□□□□□ -0.44
CGB3P0DN86 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
CGB3P0DN86 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CGB3P0DN86 AC233724.13-201ENST00000598383 410 ntBASIC12.29□□□□□ -0.44
CGB3P0DN86 IGHV3-72-202ENST00000621503 303 ntBASIC12.29□□□□□ -0.44
CGB3P0DN86 AP001002.3-201ENST00000623482 206 ntBASIC12.29□□□□□ -0.44
CGB3P0DN86 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CGB3P0DN86 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CGB3P0DN86 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CGB3P0DN86 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CGB3P0DN86 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CGB3P0DN86 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.29□□□□□ -0.44
CGB3P0DN86 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC12.29□□□□□ -0.44
CGB3P0DN86 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CGB3P0DN86 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CGB3P0DN86 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CGB3P0DN86 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CGB3P0DN86 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CGB3P0DN86 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CGB3P0DN86 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CGB3P0DN86 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.29□□□□□ -0.44
CGB3P0DN86 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CGB3P0DN86 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC12.29□□□□□ -0.44
CGB3P0DN86 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CGB3P0DN86 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CGB3P0DN86 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC12.28□□□□□ -0.44
CGB3P0DN86 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC12.28□□□□□ -0.44
CGB3P0DN86 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CGB3P0DN86 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CGB3P0DN86 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CGB3P0DN86 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
CGB3P0DN86 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC12.28□□□□□ -0.44
CGB3P0DN86 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CGB3P0DN86 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CGB3P0DN86 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CGB3P0DN86 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CGB3P0DN86 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CGB3P0DN86 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
CGB3P0DN86 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CGB3P0DN86 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CGB3P0DN86 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CGB3P0DN86 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CGB3P0DN86 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.28□□□□□ -0.44
CGB3P0DN86 AC020910.5-201ENST00000623668 1865 ntBASIC12.28□□□□□ -0.44
CGB3P0DN86 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CGB3P0DN86 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CGB3P0DN86 TPM3P8-201ENST00000330554 643 ntBASIC12.28□□□□□ -0.44
CGB3P0DN86 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CGB3P0DN86 CD8B2-202ENST00000417670 633 ntBASIC12.28□□□□□ -0.44
CGB3P0DN86 CNN2P8-201ENST00000421872 913 ntBASIC12.28□□□□□ -0.44
CGB3P0DN86 BCRP2-202ENST00000447763 634 ntBASIC12.28□□□□□ -0.44
CGB3P0DN86 BCRP6-201ENST00000510112 632 ntBASIC12.28□□□□□ -0.44
CGB3P0DN86 BCRP7-201ENST00000511549 544 ntBASIC12.28□□□□□ -0.44
CGB3P0DN86 RNA5SP486-201ENST00000515961 83 ntBASIC12.28□□□□□ -0.44
CGB3P0DN86 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC12.28□□□□□ -0.44
CGB3P0DN86 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.28□□□□□ -0.44
CGB3P0DN86 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC12.28□□□□□ -0.44
CGB3P0DN86 RPL28-206ENST00000558752 671 ntTSL 3 BASIC12.28□□□□□ -0.44
CGB3P0DN86 AC106820.3-201ENST00000561653 397 ntBASIC12.28□□□□□ -0.44
CGB3P0DN86 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC12.28□□□□□ -0.44
CGB3P0DN86 AL022328.1-201ENST00000610050 478 ntBASIC12.28□□□□□ -0.44
CGB3P0DN86 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC12.28□□□□□ -0.44
CGB3P0DN86 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CGB3P0DN86 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CGB3P0DN86 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.28□□□□□ -0.44
CGB3P0DN86 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.28□□□□□ -0.44
CGB3P0DN86 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
CGB3P0DN86 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CGB3P0DN86 INTS4P1-203ENST00000641008 3683 ntBASIC12.28□□□□□ -0.44
CGB3P0DN86 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.28□□□□□ -0.44
CGB3P0DN86 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms