Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBCP0CG48 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBCP0CG48 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBCP0CG48 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UBCP0CG48 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBCP0CG48 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBCP0CG48 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBCP0CG48 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UBCP0CG48 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
UBCP0CG48 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UBCP0CG48 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
UBCP0CG48 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBCP0CG48 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.25□□□□□ -0.29
UBCP0CG48 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.25□□□□□ -0.29
UBCP0CG48 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.25□□□□□ -0.29
UBCP0CG48 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.25□□□□□ -0.29
UBCP0CG48 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UBCP0CG48 AC067863.1-201ENST00000494933 530 ntBASIC13.25□□□□□ -0.29
UBCP0CG48 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.25□□□□□ -0.29
UBCP0CG48 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.25□□□□□ -0.29
UBCP0CG48 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.25□□□□□ -0.29
UBCP0CG48 AC092865.5-201ENST00000545435 363 ntBASIC13.25□□□□□ -0.29
UBCP0CG48 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
UBCP0CG48 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.25□□□□□ -0.29
UBCP0CG48 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UBCP0CG48 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.25□□□□□ -0.29
UBCP0CG48 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
UBCP0CG48 AL158211.3-201ENST00000607385 239 ntBASIC13.25□□□□□ -0.29
UBCP0CG48 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UBCP0CG48 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBCP0CG48 AL158212.4-201ENST00000624062 1286 ntBASIC13.25□□□□□ -0.29
UBCP0CG48 AC134684.3-201ENST00000641758 218 ntBASIC13.25□□□□□ -0.29
UBCP0CG48 CICP17-201ENST00000418553 2377 ntBASIC13.25□□□□□ -0.29
UBCP0CG48 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBCP0CG48 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBCP0CG48 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UBCP0CG48 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBCP0CG48 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.25□□□□□ -0.29
UBCP0CG48 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.25□□□□□ -0.29
UBCP0CG48 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UBCP0CG48 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.25□□□□□ -0.29
UBCP0CG48 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBCP0CG48 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBCP0CG48 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UBCP0CG48 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
UBCP0CG48 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
UBCP0CG48 AL359881.3-201ENST00000602640 1721 ntBASIC13.25□□□□□ -0.29
UBCP0CG48 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBCP0CG48 AC097359.2-201ENST00000604992 2389 ntBASIC13.24□□□□□ -0.29
UBCP0CG48 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.24□□□□□ -0.29
UBCP0CG48 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBCP0CG48 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBCP0CG48 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBCP0CG48 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
UBCP0CG48 TCAF1P1-201ENST00000414990 2232 ntBASIC13.24□□□□□ -0.29
UBCP0CG48 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBCP0CG48 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.24□□□□□ -0.29
UBCP0CG48 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBCP0CG48 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBCP0CG48 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
UBCP0CG48 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
UBCP0CG48 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.24□□□□□ -0.29
UBCP0CG48 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
UBCP0CG48 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBCP0CG48 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBCP0CG48 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.24□□□□□ -0.29
UBCP0CG48 AP001267.2-201ENST00000532619 2086 ntBASIC13.24□□□□□ -0.29
UBCP0CG48 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.24□□□□□ -0.29
UBCP0CG48 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.24□□□□□ -0.29
UBCP0CG48 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
UBCP0CG48 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
UBCP0CG48 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBCP0CG48 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBCP0CG48 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBCP0CG48 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBCP0CG48 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
UBCP0CG48 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.24□□□□□ -0.29
UBCP0CG48 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBCP0CG48 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
UBCP0CG48 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.24□□□□□ -0.29
UBCP0CG48 AL645937.2-201ENST00000396808 931 ntBASIC13.24□□□□□ -0.29
UBCP0CG48 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
UBCP0CG48 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.24□□□□□ -0.29
UBCP0CG48 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.24□□□□□ -0.29
UBCP0CG48 AP000347.1-202ENST00000435868 847 ntBASIC13.24□□□□□ -0.29
UBCP0CG48 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.24□□□□□ -0.29
UBCP0CG48 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.24□□□□□ -0.29
UBCP0CG48 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBCP0CG48 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.24□□□□□ -0.29
UBCP0CG48 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBCP0CG48 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.24□□□□□ -0.29
UBCP0CG48 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.24□□□□□ -0.29
UBCP0CG48 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.24□□□□□ -0.29
UBCP0CG48 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.24□□□□□ -0.29
UBCP0CG48 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.24□□□□□ -0.29
UBCP0CG48 AL844908.2-201ENST00000609461 460 ntBASIC13.24□□□□□ -0.29
UBCP0CG48 AL596442.2-201ENST00000610240 980 ntBASIC13.24□□□□□ -0.29
UBCP0CG48 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC13.24□□□□□ -0.29
UBCP0CG48 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.24□□□□□ -0.29
UBCP0CG48 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms