Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.88■□□□□ 0.13
RTN3O95197 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RTN3O95197 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
RTN3O95197 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RTN3O95197 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.88■□□□□ 0.13
RTN3O95197 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.88■□□□□ 0.13
RTN3O95197 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
RTN3O95197 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RTN3O95197 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.88■□□□□ 0.13
RTN3O95197 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RTN3O95197 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RTN3O95197 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.88■□□□□ 0.13
RTN3O95197 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RTN3O95197 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
RTN3O95197 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.88■□□□□ 0.13
RTN3O95197 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RTN3O95197 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RTN3O95197 AL137783.1-201ENST00000623494 1896 ntBASIC15.88■□□□□ 0.13
RTN3O95197 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RTN3O95197 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RTN3O95197 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RTN3O95197 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.88■□□□□ 0.13
RTN3O95197 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
RTN3O95197 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
RTN3O95197 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RTN3O95197 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.88■□□□□ 0.13
RTN3O95197 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.88■□□□□ 0.13
RTN3O95197 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
RTN3O95197 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RTN3O95197 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.88■□□□□ 0.13
RTN3O95197 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RTN3O95197 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RTN3O95197 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RTN3O95197 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.87■□□□□ 0.13
RTN3O95197 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RTN3O95197 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RTN3O95197 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
RTN3O95197 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
RTN3O95197 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RTN3O95197 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
RTN3O95197 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RTN3O95197 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RTN3O95197 AC005840.4-201ENST00000541242 2494 ntBASIC15.87■□□□□ 0.13
RTN3O95197 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
RTN3O95197 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.87■□□□□ 0.13
RTN3O95197 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RTN3O95197 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RTN3O95197 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RTN3O95197 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.87■□□□□ 0.13
RTN3O95197 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.87■□□□□ 0.13
RTN3O95197 BRWD1P1-201ENST00000401091 371 ntBASIC15.87■□□□□ 0.13
RTN3O95197 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
RTN3O95197 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.87■□□□□ 0.13
RTN3O95197 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RTN3O95197 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
RTN3O95197 MESTP3-201ENST00000503460 968 ntBASIC15.87■□□□□ 0.13
RTN3O95197 FTLP10-202ENST00000505798 471 ntBASIC15.87■□□□□ 0.13
RTN3O95197 AC092658.1-201ENST00000505836 891 ntBASIC15.87■□□□□ 0.13
RTN3O95197 AC026434.2-201ENST00000506094 1078 ntBASIC15.87■□□□□ 0.13
RTN3O95197 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.87■□□□□ 0.13
RTN3O95197 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RTN3O95197 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
RTN3O95197 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.87■□□□□ 0.13
RTN3O95197 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.87■□□□□ 0.13
RTN3O95197 RN7SL560P-201ENST00000577943 264 ntBASIC15.87■□□□□ 0.13
RTN3O95197 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.87■□□□□ 0.13
RTN3O95197 MIR6799-201ENST00000620297 69 ntBASIC15.87■□□□□ 0.13
RTN3O95197 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.87■□□□□ 0.13
RTN3O95197 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RTN3O95197 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RTN3O95197 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RTN3O95197 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.87■□□□□ 0.13
RTN3O95197 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RTN3O95197 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RTN3O95197 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RTN3O95197 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.87■□□□□ 0.13
RTN3O95197 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
RTN3O95197 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RTN3O95197 LILRP1-201ENST00000444199 1370 ntBASIC15.87■□□□□ 0.13
RTN3O95197 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.87■□□□□ 0.13
RTN3O95197 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RTN3O95197 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RTN3O95197 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC15.86■□□□□ 0.13
RTN3O95197 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RTN3O95197 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.86■□□□□ 0.13
RTN3O95197 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RTN3O95197 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.86■□□□□ 0.13
RTN3O95197 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RTN3O95197 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
RTN3O95197 AC107918.4-201ENST00000641966 3141 ntBASIC15.86■□□□□ 0.13
RTN3O95197 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RTN3O95197 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
RTN3O95197 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RTN3O95197 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.86■□□□□ 0.13
RTN3O95197 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RTN3O95197 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RTN3O95197 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.86■□□□□ 0.13
RTN3O95197 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RTN3O95197 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.86■□□□□ 0.13
RTN3O95197 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms