Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 LINC01101-201ENST00000622953 1884 ntBASIC14.09□□□□□ -0.15
CTNSO60931 AC018442.1-201ENST00000421439 2061 ntBASIC14.09□□□□□ -0.15
CTNSO60931 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.09□□□□□ -0.15
CTNSO60931 MYO15B-237ENST00000642007 4893 ntBASIC14.09□□□□□ -0.15
CTNSO60931 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CTNSO60931 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CTNSO60931 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CTNSO60931 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CTNSO60931 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.09□□□□□ -0.15
CTNSO60931 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CTNSO60931 AL138725.1-201ENST00000407347 1314 ntBASIC14.09□□□□□ -0.15
CTNSO60931 AHCYP2-201ENST00000430630 1300 ntBASIC14.09□□□□□ -0.15
CTNSO60931 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CTNSO60931 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CTNSO60931 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CTNSO60931 SALL4P5-201ENST00000419001 1760 ntBASIC14.09□□□□□ -0.15
CTNSO60931 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.09□□□□□ -0.15
CTNSO60931 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CTNSO60931 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CTNSO60931 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CTNSO60931 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CTNSO60931 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CTNSO60931 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CTNSO60931 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
CTNSO60931 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
CTNSO60931 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CTNSO60931 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.08□□□□□ -0.15
CTNSO60931 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CTNSO60931 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTNSO60931 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.08□□□□□ -0.16
CTNSO60931 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTNSO60931 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTNSO60931 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.08□□□□□ -0.16
CTNSO60931 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTNSO60931 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CTNSO60931 AC003102.2-201ENST00000589195 1469 ntBASIC14.08□□□□□ -0.16
CTNSO60931 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CTNSO60931 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTNSO60931 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTNSO60931 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.08□□□□□ -0.16
CTNSO60931 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTNSO60931 ANKRD19P-201ENST00000338192 862 ntBASIC14.08□□□□□ -0.16
CTNSO60931 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CTNSO60931 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.08□□□□□ -0.16
CTNSO60931 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTNSO60931 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTNSO60931 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CTNSO60931 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.08□□□□□ -0.16
CTNSO60931 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.08□□□□□ -0.16
CTNSO60931 ATP5G2P4-201ENST00000442175 420 ntBASIC14.08□□□□□ -0.16
CTNSO60931 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.08□□□□□ -0.16
CTNSO60931 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
CTNSO60931 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.08□□□□□ -0.16
CTNSO60931 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.08□□□□□ -0.16
CTNSO60931 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.08□□□□□ -0.16
CTNSO60931 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.08□□□□□ -0.16
CTNSO60931 AC023310.1-201ENST00000554836 735 ntBASIC14.08□□□□□ -0.16
CTNSO60931 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.08□□□□□ -0.16
CTNSO60931 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.08□□□□□ -0.16
CTNSO60931 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.08□□□□□ -0.16
CTNSO60931 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CTNSO60931 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CTNSO60931 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.08□□□□□ -0.16
CTNSO60931 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.08□□□□□ -0.16
CTNSO60931 AC133552.6-201ENST00000613406 534 ntBASIC14.08□□□□□ -0.16
CTNSO60931 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTNSO60931 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CTNSO60931 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CTNSO60931 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTNSO60931 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTNSO60931 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTNSO60931 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.08□□□□□ -0.16
CTNSO60931 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.08□□□□□ -0.16
CTNSO60931 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CTNSO60931 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTNSO60931 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTNSO60931 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.08□□□□□ -0.16
CTNSO60931 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CTNSO60931 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTNSO60931 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTNSO60931 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CTNSO60931 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTNSO60931 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.07□□□□□ -0.16
CTNSO60931 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CTNSO60931 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTNSO60931 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CTNSO60931 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTNSO60931 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.07□□□□□ -0.16
CTNSO60931 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTNSO60931 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.07□□□□□ -0.16
CTNSO60931 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTNSO60931 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CTNSO60931 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CTNSO60931 AL354989.2-201ENST00000435838 1540 ntBASIC14.07□□□□□ -0.16
CTNSO60931 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.07□□□□□ -0.16
CTNSO60931 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CTNSO60931 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTNSO60931 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTNSO60931 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CTNSO60931 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms