Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
CHMP2AO43633 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP2AO43633 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.91■□□□□ 0.3
CHMP2AO43633 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.91■□□□□ 0.3
CHMP2AO43633 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP2AO43633 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP2AO43633 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP2AO43633 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.9■□□□□ 0.3
CHMP2AO43633 AJ011931.1-201ENST00000618749 2492 ntBASIC16.9■□□□□ 0.3
CHMP2AO43633 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CHMP2AO43633 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CHMP2AO43633 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.9■□□□□ 0.3
CHMP2AO43633 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP2AO43633 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP2AO43633 RNA5SP412-201ENST00000516234 123 ntBASIC16.9■□□□□ 0.3
CHMP2AO43633 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16.9■□□□□ 0.3
CHMP2AO43633 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.9■□□□□ 0.3
CHMP2AO43633 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16.9■□□□□ 0.3
CHMP2AO43633 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP2AO43633 KRT8P4-201ENST00000509735 1454 ntBASIC16.9■□□□□ 0.3
CHMP2AO43633 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP2AO43633 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CHMP2AO43633 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.9■□□□□ 0.3
CHMP2AO43633 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP2AO43633 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP2AO43633 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.9■□□□□ 0.3
CHMP2AO43633 AC011840.2-201ENST00000563063 1520 ntBASIC16.9■□□□□ 0.3
CHMP2AO43633 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.9■□□□□ 0.3
CHMP2AO43633 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP2AO43633 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
CHMP2AO43633 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP2AO43633 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP2AO43633 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CHMP2AO43633 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CHMP2AO43633 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
CHMP2AO43633 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP2AO43633 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP2AO43633 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP2AO43633 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP2AO43633 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
CHMP2AO43633 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP2AO43633 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.89■□□□□ 0.29
CHMP2AO43633 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP2AO43633 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP2AO43633 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP2AO43633 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP2AO43633 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP2AO43633 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP2AO43633 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP2AO43633 RPL13AP20-201ENST00000459725 609 ntBASIC16.89■□□□□ 0.29
CHMP2AO43633 MESTP3-201ENST00000503460 968 ntBASIC16.89■□□□□ 0.29
CHMP2AO43633 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.89■□□□□ 0.29
CHMP2AO43633 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.89■□□□□ 0.29
CHMP2AO43633 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP2AO43633 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
CHMP2AO43633 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.89■□□□□ 0.29
CHMP2AO43633 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC16.89■□□□□ 0.29
CHMP2AO43633 AC073413.1-201ENST00000603927 732 ntBASIC16.89■□□□□ 0.29
CHMP2AO43633 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CHMP2AO43633 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP2AO43633 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CHMP2AO43633 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP2AO43633 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP2AO43633 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP2AO43633 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP2AO43633 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP2AO43633 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP2AO43633 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP2AO43633 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.89■□□□□ 0.29
CHMP2AO43633 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP2AO43633 CICP23-201ENST00000605013 2741 ntBASIC16.89■□□□□ 0.29
CHMP2AO43633 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.89■□□□□ 0.29
CHMP2AO43633 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC16.88■□□□□ 0.29
CHMP2AO43633 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
CHMP2AO43633 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CHMP2AO43633 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP2AO43633 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP2AO43633 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP2AO43633 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP2AO43633 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP2AO43633 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC16.88■□□□□ 0.29
CHMP2AO43633 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CHMP2AO43633 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP2AO43633 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.88■□□□□ 0.29
CHMP2AO43633 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP2AO43633 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.88■□□□□ 0.29
CHMP2AO43633 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.88■□□□□ 0.29
CHMP2AO43633 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP2AO43633 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CHMP2AO43633 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.88■□□□□ 0.29
CHMP2AO43633 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP2AO43633 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP2AO43633 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP2AO43633 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP2AO43633 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP2AO43633 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP2AO43633 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CHMP2AO43633 CNN2P10-201ENST00000443067 918 ntBASIC16.88■□□□□ 0.29
CHMP2AO43633 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC16.88■□□□□ 0.29
CHMP2AO43633 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms