Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.12■□□□□ 0.33
ATP2A1O14983 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2A1O14983 AC023024.2-201ENST00000623561 1993 ntBASIC17.12■□□□□ 0.33
ATP2A1O14983 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2A1O14983 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2A1O14983 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2A1O14983 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2A1O14983 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
ATP2A1O14983 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC17.12■□□□□ 0.33
ATP2A1O14983 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2A1O14983 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC17.12■□□□□ 0.33
ATP2A1O14983 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
ATP2A1O14983 RPL18P13-201ENST00000478088 569 ntBASIC17.12■□□□□ 0.33
ATP2A1O14983 HLA-J-204ENST00000495278 958 ntBASIC17.12■□□□□ 0.33
ATP2A1O14983 AC024681.1-201ENST00000521917 487 ntBASIC17.12■□□□□ 0.33
ATP2A1O14983 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC17.12■□□□□ 0.33
ATP2A1O14983 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC17.12■□□□□ 0.33
ATP2A1O14983 AL132994.2-201ENST00000603120 687 ntBASIC17.12■□□□□ 0.33
ATP2A1O14983 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2A1O14983 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2A1O14983 AL805961.1-203ENST00000641078 1258 ntBASIC17.12■□□□□ 0.33
ATP2A1O14983 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
ATP2A1O14983 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2A1O14983 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2A1O14983 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2A1O14983 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2A1O14983 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2A1O14983 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.12■□□□□ 0.33
ATP2A1O14983 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2A1O14983 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2A1O14983 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
ATP2A1O14983 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2A1O14983 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2A1O14983 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2A1O14983 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2A1O14983 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2A1O14983 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2A1O14983 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
ATP2A1O14983 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2A1O14983 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2A1O14983 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ATP2A1O14983 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.11■□□□□ 0.33
ATP2A1O14983 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2A1O14983 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
ATP2A1O14983 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2A1O14983 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2A1O14983 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2A1O14983 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2A1O14983 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC17.11■□□□□ 0.33
ATP2A1O14983 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC17.11■□□□□ 0.33
ATP2A1O14983 VDAC1P1-201ENST00000439229 848 ntBASIC17.11■□□□□ 0.33
ATP2A1O14983 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC17.11■□□□□ 0.33
ATP2A1O14983 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC17.11■□□□□ 0.33
ATP2A1O14983 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC17.11■□□□□ 0.33
ATP2A1O14983 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC17.11■□□□□ 0.33
ATP2A1O14983 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC17.11■□□□□ 0.33
ATP2A1O14983 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC17.11■□□□□ 0.33
ATP2A1O14983 AL161670.2-201ENST00000557650 1227 ntBASIC17.11■□□□□ 0.33
ATP2A1O14983 VPS18-202ENST00000558474 873 ntTSL 3 BASIC17.11■□□□□ 0.33
ATP2A1O14983 COG4-212ENST00000564653 590 ntTSL 5 BASIC17.11■□□□□ 0.33
ATP2A1O14983 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC17.11■□□□□ 0.33
ATP2A1O14983 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC17.11■□□□□ 0.33
ATP2A1O14983 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC17.11■□□□□ 0.33
ATP2A1O14983 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC17.11■□□□□ 0.33
ATP2A1O14983 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC17.11■□□□□ 0.33
ATP2A1O14983 AC091544.8-201ENST00000619490 361 ntBASIC17.11■□□□□ 0.33
ATP2A1O14983 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ATP2A1O14983 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC17.11■□□□□ 0.33
ATP2A1O14983 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ATP2A1O14983 AC008132.1-202ENST00000342005 1389 ntBASIC17.11■□□□□ 0.33
ATP2A1O14983 AMT-239ENST00000636865 1914 ntTSL 5 BASIC17.11■□□□□ 0.33
ATP2A1O14983 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2A1O14983 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.11■□□□□ 0.33
ATP2A1O14983 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2A1O14983 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.11■□□□□ 0.33
ATP2A1O14983 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2A1O14983 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2A1O14983 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ATP2A1O14983 AC244394.1-201ENST00000435000 1665 ntBASIC17.1■□□□□ 0.33
ATP2A1O14983 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.1■□□□□ 0.33
ATP2A1O14983 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP2A1O14983 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.1■□□□□ 0.33
ATP2A1O14983 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP2A1O14983 REXO1L2P-201ENST00000425429 2069 ntBASIC17.1■□□□□ 0.33
ATP2A1O14983 ELK2AP-201ENST00000392510 1007 ntBASIC17.1■□□□□ 0.33
ATP2A1O14983 SLC16A6P1-201ENST00000413214 1059 ntBASIC17.1■□□□□ 0.33
ATP2A1O14983 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC17.1■□□□□ 0.33
ATP2A1O14983 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ATP2A1O14983 KLF2P1-201ENST00000447438 1042 ntBASIC17.1■□□□□ 0.33
ATP2A1O14983 AL133466.1-201ENST00000447582 150 ntBASIC17.1■□□□□ 0.33
ATP2A1O14983 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC17.1■□□□□ 0.33
ATP2A1O14983 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP2A1O14983 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC17.1■□□□□ 0.33
ATP2A1O14983 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC17.1■□□□□ 0.33
ATP2A1O14983 RN7SL720P-201ENST00000488178 304 ntBASIC17.1■□□□□ 0.33
ATP2A1O14983 IMP3P2-201ENST00000489760 475 ntBASIC17.1■□□□□ 0.33
ATP2A1O14983 GCOM2-201ENST00000509133 1104 ntBASIC17.1■□□□□ 0.33
ATP2A1O14983 AC245884.6-201ENST00000515672 1067 ntBASIC17.1■□□□□ 0.33
ATP2A1O14983 AC131206.1-201ENST00000538078 1211 ntBASIC17.1■□□□□ 0.33
ATP2A1O14983 FOS-206ENST00000555347 1280 ntTSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms