Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.91□□□□□ -0.34
TMEM235A6NFC5 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM235A6NFC5 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM235A6NFC5 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM235A6NFC5 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM235A6NFC5 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 MCCD1P2-201ENST00000423228 335 ntBASIC12.9□□□□□ -0.34
TMEM235A6NFC5 FAM58DP-201ENST00000428076 619 ntBASIC12.9□□□□□ -0.34
TMEM235A6NFC5 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 AL079307.3-201ENST00000556114 283 ntBASIC12.9□□□□□ -0.34
TMEM235A6NFC5 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 AC025048.3-201ENST00000590609 569 ntBASIC12.9□□□□□ -0.34
TMEM235A6NFC5 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 AC005702.4-201ENST00000618393 416 ntBASIC12.9□□□□□ -0.34
TMEM235A6NFC5 C20orf181-201ENST00000623918 480 ntBASIC12.9□□□□□ -0.34
TMEM235A6NFC5 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.9□□□□□ -0.34
TMEM235A6NFC5 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
TMEM235A6NFC5 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
TMEM235A6NFC5 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
TMEM235A6NFC5 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.9□□□□□ -0.35
TMEM235A6NFC5 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC12.89□□□□□ -0.35
TMEM235A6NFC5 AL360270.3-201ENST00000609118 1348 ntBASIC12.89□□□□□ -0.35
TMEM235A6NFC5 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.89□□□□□ -0.35
TMEM235A6NFC5 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.89□□□□□ -0.35
TMEM235A6NFC5 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TMEM235A6NFC5 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TMEM235A6NFC5 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
TMEM235A6NFC5 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
TMEM235A6NFC5 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TMEM235A6NFC5 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TMEM235A6NFC5 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TMEM235A6NFC5 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TMEM235A6NFC5 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.89□□□□□ -0.35
TMEM235A6NFC5 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.89□□□□□ -0.35
TMEM235A6NFC5 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.89□□□□□ -0.35
TMEM235A6NFC5 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.89□□□□□ -0.35
TMEM235A6NFC5 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
TMEM235A6NFC5 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
TMEM235A6NFC5 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
TMEM235A6NFC5 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC12.89□□□□□ -0.35
TMEM235A6NFC5 RPL13P2-201ENST00000440687 659 ntBASIC12.89□□□□□ -0.35
TMEM235A6NFC5 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC12.89□□□□□ -0.35
TMEM235A6NFC5 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC12.89□□□□□ -0.35
TMEM235A6NFC5 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC12.89□□□□□ -0.35
TMEM235A6NFC5 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC12.89□□□□□ -0.35
TMEM235A6NFC5 KRT126P-201ENST00000549467 1181 ntBASIC12.89□□□□□ -0.35
TMEM235A6NFC5 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
TMEM235A6NFC5 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC12.89□□□□□ -0.35
TMEM235A6NFC5 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC12.89□□□□□ -0.35
TMEM235A6NFC5 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC12.89□□□□□ -0.35
TMEM235A6NFC5 AC022145.2-201ENST00000598203 171 ntBASIC12.89□□□□□ -0.35
TMEM235A6NFC5 LINC01115-203ENST00000606068 577 ntBASIC12.89□□□□□ -0.35
TMEM235A6NFC5 CICP8-201ENST00000455800 2813 ntBASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms