Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 YBX2P1-201ENST00000394192 760 ntBASIC13.1□□□□□ -0.31
SHISA3A0PJX4 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 AL033527.5-202ENST00000641632 1098 ntBASIC13.1□□□□□ -0.31
SHISA3A0PJX4 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 TSN-212ENST00000536142 3328 ntTSL 2 BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
SHISA3A0PJX4 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SHISA3A0PJX4 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.09□□□□□ -0.31
SHISA3A0PJX4 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC13.09□□□□□ -0.31
SHISA3A0PJX4 AL365181.3-201ENST00000605886 3222 ntBASIC13.09□□□□□ -0.31
SHISA3A0PJX4 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SHISA3A0PJX4 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SHISA3A0PJX4 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SHISA3A0PJX4 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC13.09□□□□□ -0.31
SHISA3A0PJX4 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.09□□□□□ -0.31
SHISA3A0PJX4 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SHISA3A0PJX4 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
SHISA3A0PJX4 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.09□□□□□ -0.31
SHISA3A0PJX4 AL157996.1-201ENST00000624684 2299 ntBASIC13.09□□□□□ -0.31
SHISA3A0PJX4 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SHISA3A0PJX4 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.09□□□□□ -0.31
SHISA3A0PJX4 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SHISA3A0PJX4 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SHISA3A0PJX4 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.09□□□□□ -0.31
SHISA3A0PJX4 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SHISA3A0PJX4 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SHISA3A0PJX4 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
SHISA3A0PJX4 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SHISA3A0PJX4 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
SHISA3A0PJX4 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SHISA3A0PJX4 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SHISA3A0PJX4 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SHISA3A0PJX4 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.09□□□□□ -0.31
SHISA3A0PJX4 AP000347.1-202ENST00000435868 847 ntBASIC13.09□□□□□ -0.31
SHISA3A0PJX4 SPDYE14P-201ENST00000442619 822 ntBASIC13.09□□□□□ -0.31
SHISA3A0PJX4 SERPINA7P1-201ENST00000443077 631 ntBASIC13.09□□□□□ -0.31
SHISA3A0PJX4 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.09□□□□□ -0.31
SHISA3A0PJX4 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.09□□□□□ -0.31
SHISA3A0PJX4 AC004066.1-201ENST00000502488 802 ntBASIC13.09□□□□□ -0.31
SHISA3A0PJX4 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC13.09□□□□□ -0.31
SHISA3A0PJX4 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms