Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 BRI3BPP1-201ENST00000594224 787 ntBASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 LINC02560-201ENST00000596379 459 ntBASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 AC107373.2-201ENST00000607735 490 ntBASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 AC008761.3-201ENST00000624803 892 ntBASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 SERF2-217ENST00000630046 862 ntTSL 5 BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 DRD5P1-201ENST00000456605 1438 ntBASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 ZBED1P1-201ENST00000502364 1930 ntBASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 REXO1L4P-201ENST00000605109 1937 ntBASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 INTS4P2-202ENST00000614726 2019 ntBASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 ADAMTS7P1-201ENST00000613213 4793 ntBASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 AC007541.1-201ENST00000570282 1469 ntBASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 MPV17-208ENST00000405076 603 ntTSL 5 BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 AL442647.2-201ENST00000429864 857 ntBASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 AL353779.1-201ENST00000434793 351 ntBASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 AC093813.1-201ENST00000605066 256 ntBASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC11.4□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms