Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.72□□□□□ -0.05
RNF11Q9Y3C5 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF11Q9Y3C5 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.72□□□□□ -0.05
RNF11Q9Y3C5 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF11Q9Y3C5 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.72□□□□□ -0.05
RNF11Q9Y3C5 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.72□□□□□ -0.05
RNF11Q9Y3C5 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.72□□□□□ -0.05
RNF11Q9Y3C5 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF11Q9Y3C5 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.71□□□□□ -0.05
RNF11Q9Y3C5 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF11Q9Y3C5 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
RNF11Q9Y3C5 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.71□□□□□ -0.05
RNF11Q9Y3C5 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RNF11Q9Y3C5 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
RNF11Q9Y3C5 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF11Q9Y3C5 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
RNF11Q9Y3C5 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RNF11Q9Y3C5 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RNF11Q9Y3C5 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RNF11Q9Y3C5 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF11Q9Y3C5 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RNF11Q9Y3C5 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.71□□□□□ -0.05
RNF11Q9Y3C5 MEP1AP4-201ENST00000423244 1087 ntBASIC14.71□□□□□ -0.05
RNF11Q9Y3C5 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.71□□□□□ -0.05
RNF11Q9Y3C5 RNA5SP421-201ENST00000516864 134 ntBASIC14.71□□□□□ -0.05
RNF11Q9Y3C5 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.71□□□□□ -0.05
RNF11Q9Y3C5 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.71□□□□□ -0.05
RNF11Q9Y3C5 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.71□□□□□ -0.05
RNF11Q9Y3C5 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.71□□□□□ -0.05
RNF11Q9Y3C5 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.71□□□□□ -0.05
RNF11Q9Y3C5 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.71□□□□□ -0.05
RNF11Q9Y3C5 BRI3BPP1-201ENST00000594224 787 ntBASIC14.71□□□□□ -0.05
RNF11Q9Y3C5 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.71□□□□□ -0.05
RNF11Q9Y3C5 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.71□□□□□ -0.05
RNF11Q9Y3C5 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RNF11Q9Y3C5 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
RNF11Q9Y3C5 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.71□□□□□ -0.05
RNF11Q9Y3C5 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.71□□□□□ -0.05
RNF11Q9Y3C5 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF11Q9Y3C5 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF11Q9Y3C5 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RNF11Q9Y3C5 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
RNF11Q9Y3C5 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
RNF11Q9Y3C5 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RNF11Q9Y3C5 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RNF11Q9Y3C5 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RNF11Q9Y3C5 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 DGCR9-201ENST00000609630 2415 ntBASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 RRP7BP-205ENST00000566851 833 ntBASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 AC093813.1-201ENST00000605066 256 ntBASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 SLC7A15P-201ENST00000424028 1363 ntBASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.7□□□□□ -0.06
RNF11Q9Y3C5 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms