Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LRCH1Q9Y2L9 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
LRCH1Q9Y2L9 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
LRCH1Q9Y2L9 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRCH1Q9Y2L9 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
LRCH1Q9Y2L9 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRCH1Q9Y2L9 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
LRCH1Q9Y2L9 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRCH1Q9Y2L9 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LRCH1Q9Y2L9 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
LRCH1Q9Y2L9 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
LRCH1Q9Y2L9 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRCH1Q9Y2L9 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRCH1Q9Y2L9 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.38□□□□□ -0.11
LRCH1Q9Y2L9 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRCH1Q9Y2L9 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.38□□□□□ -0.11
LRCH1Q9Y2L9 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRCH1Q9Y2L9 NME1-209ENST00000511355 1645 ntTSL 5 BASIC14.38□□□□□ -0.11
LRCH1Q9Y2L9 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRCH1Q9Y2L9 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
LRCH1Q9Y2L9 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
LRCH1Q9Y2L9 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRCH1Q9Y2L9 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LRCH1Q9Y2L9 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LRCH1Q9Y2L9 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRCH1Q9Y2L9 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRCH1Q9Y2L9 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.38□□□□□ -0.11
LRCH1Q9Y2L9 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.38□□□□□ -0.11
LRCH1Q9Y2L9 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.38□□□□□ -0.11
LRCH1Q9Y2L9 AL450472.2-201ENST00000603663 1156 ntBASIC14.38□□□□□ -0.11
LRCH1Q9Y2L9 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRCH1Q9Y2L9 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.38□□□□□ -0.11
LRCH1Q9Y2L9 FAM197Y3-203ENST00000618346 717 ntBASIC14.38□□□□□ -0.11
LRCH1Q9Y2L9 AL805961.1-202ENST00000641562 540 ntBASIC14.38□□□□□ -0.11
LRCH1Q9Y2L9 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC14.38□□□□□ -0.11
LRCH1Q9Y2L9 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC14.38□□□□□ -0.11
LRCH1Q9Y2L9 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC14.38□□□□□ -0.11
LRCH1Q9Y2L9 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRCH1Q9Y2L9 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRCH1Q9Y2L9 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRCH1Q9Y2L9 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LRCH1Q9Y2L9 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
LRCH1Q9Y2L9 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRCH1Q9Y2L9 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LRCH1Q9Y2L9 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRCH1Q9Y2L9 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
LRCH1Q9Y2L9 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.38□□□□□ -0.11
LRCH1Q9Y2L9 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LRCH1Q9Y2L9 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LRCH1Q9Y2L9 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC14.38□□□□□ -0.11
LRCH1Q9Y2L9 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC14.38□□□□□ -0.11
LRCH1Q9Y2L9 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRCH1Q9Y2L9 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRCH1Q9Y2L9 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LRCH1Q9Y2L9 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRCH1Q9Y2L9 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRCH1Q9Y2L9 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LRCH1Q9Y2L9 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRCH1Q9Y2L9 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRCH1Q9Y2L9 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LRCH1Q9Y2L9 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRCH1Q9Y2L9 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRCH1Q9Y2L9 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRCH1Q9Y2L9 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRCH1Q9Y2L9 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
LRCH1Q9Y2L9 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRCH1Q9Y2L9 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRCH1Q9Y2L9 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LRCH1Q9Y2L9 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LRCH1Q9Y2L9 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRCH1Q9Y2L9 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
LRCH1Q9Y2L9 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.37□□□□□ -0.11
LRCH1Q9Y2L9 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.37□□□□□ -0.11
LRCH1Q9Y2L9 PTCHD3P3-201ENST00000403073 906 ntBASIC14.37□□□□□ -0.11
LRCH1Q9Y2L9 MED15P5-201ENST00000423150 992 ntBASIC14.37□□□□□ -0.11
LRCH1Q9Y2L9 AC108751.1-201ENST00000490852 363 ntBASIC14.37□□□□□ -0.11
LRCH1Q9Y2L9 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.37□□□□□ -0.11
LRCH1Q9Y2L9 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRCH1Q9Y2L9 AC034105.1-201ENST00000563488 319 ntBASIC14.37□□□□□ -0.11
LRCH1Q9Y2L9 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRCH1Q9Y2L9 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.37□□□□□ -0.11
LRCH1Q9Y2L9 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRCH1Q9Y2L9 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRCH1Q9Y2L9 AC007787.1-201ENST00000588095 1583 ntBASIC14.37□□□□□ -0.11
LRCH1Q9Y2L9 AC006504.4-201ENST00000592118 1568 ntBASIC14.37□□□□□ -0.11
LRCH1Q9Y2L9 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
LRCH1Q9Y2L9 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRCH1Q9Y2L9 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRCH1Q9Y2L9 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
LRCH1Q9Y2L9 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRCH1Q9Y2L9 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
LRCH1Q9Y2L9 AC111170.3-201ENST00000624282 2464 ntBASIC14.37□□□□□ -0.11
LRCH1Q9Y2L9 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRCH1Q9Y2L9 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRCH1Q9Y2L9 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC14.37□□□□□ -0.11
LRCH1Q9Y2L9 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LRCH1Q9Y2L9 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LRCH1Q9Y2L9 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LRCH1Q9Y2L9 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LRCH1Q9Y2L9 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms