Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 TCAF2P1-201ENST00000291129 2421 ntBASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 AL138709.1-201ENST00000614840 1693 ntBASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 MIR326-201ENST00000362220 95 ntBASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 RNU1-114P-201ENST00000365297 166 ntBASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 MIR1202-201ENST00000408529 83 ntBASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 KLF2P2-201ENST00000416807 1039 ntBASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 AC114812.1-204ENST00000449669 728 ntBASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 AC091951.1-201ENST00000512854 2465 ntBASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA1Q9UND3 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.91□□□□□ -0.18
NPIPA1Q9UND3 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.91□□□□□ -0.18
NPIPA1Q9UND3 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA1Q9UND3 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA1Q9UND3 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
NPIPA1Q9UND3 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
NPIPA1Q9UND3 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA1Q9UND3 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA1Q9UND3 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA1Q9UND3 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.91□□□□□ -0.18
NPIPA1Q9UND3 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA1Q9UND3 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA1Q9UND3 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
NPIPA1Q9UND3 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA1Q9UND3 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA1Q9UND3 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA1Q9UND3 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA1Q9UND3 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA1Q9UND3 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA1Q9UND3 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
NPIPA1Q9UND3 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.91□□□□□ -0.18
NPIPA1Q9UND3 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.91□□□□□ -0.18
NPIPA1Q9UND3 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA1Q9UND3 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA1Q9UND3 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA1Q9UND3 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA1Q9UND3 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA1Q9UND3 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
NPIPA1Q9UND3 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.91□□□□□ -0.18
NPIPA1Q9UND3 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA1Q9UND3 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.91□□□□□ -0.18
NPIPA1Q9UND3 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.91□□□□□ -0.18
NPIPA1Q9UND3 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
NPIPA1Q9UND3 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC13.91□□□□□ -0.18
NPIPA1Q9UND3 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA1Q9UND3 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.91□□□□□ -0.18
NPIPA1Q9UND3 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC13.91□□□□□ -0.18
NPIPA1Q9UND3 RNA5SP486-201ENST00000515961 83 ntBASIC13.91□□□□□ -0.18
NPIPA1Q9UND3 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA1Q9UND3 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms