Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 ACKR1-201ENST00000368121 1240 ntBASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 AP001063.1-201ENST00000568332 529 ntBASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 LRRC59-203ENST00000576448 1531 ntBASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 AC055811.4-201ENST00000624039 1754 ntBASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 AC015656.1-201ENST00000624209 3578 ntBASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 AC139749.1-202ENST00000617529 3139 ntBASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
LRRC40Q9H9A6 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.29■□□□□ 0.04
LRRC40Q9H9A6 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC40Q9H9A6 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
LRRC40Q9H9A6 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.29■□□□□ 0.04
LRRC40Q9H9A6 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC40Q9H9A6 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC40Q9H9A6 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.29■□□□□ 0.04
LRRC40Q9H9A6 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC40Q9H9A6 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
LRRC40Q9H9A6 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.29■□□□□ 0.04
LRRC40Q9H9A6 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC40Q9H9A6 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.29■□□□□ 0.04
LRRC40Q9H9A6 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LRRC40Q9H9A6 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC40Q9H9A6 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC40Q9H9A6 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC40Q9H9A6 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC40Q9H9A6 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC40Q9H9A6 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC40Q9H9A6 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC40Q9H9A6 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC40Q9H9A6 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC40Q9H9A6 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC40Q9H9A6 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LRRC40Q9H9A6 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LRRC40Q9H9A6 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC40Q9H9A6 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.29■□□□□ 0.04
LRRC40Q9H9A6 ACTBP8-201ENST00000403258 1108 ntBASIC15.29■□□□□ 0.04
LRRC40Q9H9A6 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.29■□□□□ 0.04
LRRC40Q9H9A6 KRT18P25-201ENST00000508931 1278 ntBASIC15.29■□□□□ 0.04
LRRC40Q9H9A6 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC40Q9H9A6 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.29■□□□□ 0.04
LRRC40Q9H9A6 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.29■□□□□ 0.04
LRRC40Q9H9A6 MIR4745-201ENST00000577608 62 ntBASIC15.29■□□□□ 0.04
LRRC40Q9H9A6 CTBP2P3-201ENST00000585629 1255 ntBASIC15.29■□□□□ 0.04
LRRC40Q9H9A6 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.29■□□□□ 0.04
LRRC40Q9H9A6 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC40Q9H9A6 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.29■□□□□ 0.04
LRRC40Q9H9A6 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.29■□□□□ 0.04
LRRC40Q9H9A6 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.29■□□□□ 0.04
LRRC40Q9H9A6 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
LRRC40Q9H9A6 CU634019.7-201ENST00000624153 1185 ntBASIC15.29■□□□□ 0.04
LRRC40Q9H9A6 FP236241.2-201ENST00000624906 1185 ntBASIC15.29■□□□□ 0.04
LRRC40Q9H9A6 SBF1P1-201ENST00000444527 5631 ntBASIC15.29■□□□□ 0.04
LRRC40Q9H9A6 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms