Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 CNN2P10-201ENST00000443067 918 ntBASIC17.7■□□□□ 0.42
RNF41Q9H4P4 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.7■□□□□ 0.42
RNF41Q9H4P4 RNA5SP412-201ENST00000516234 123 ntBASIC17.7■□□□□ 0.42
RNF41Q9H4P4 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.7■□□□□ 0.42
RNF41Q9H4P4 AC073413.1-201ENST00000603927 732 ntBASIC17.7■□□□□ 0.42
RNF41Q9H4P4 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF41Q9H4P4 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RNF41Q9H4P4 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF41Q9H4P4 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF41Q9H4P4 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
RNF41Q9H4P4 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF41Q9H4P4 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC17.7■□□□□ 0.42
RNF41Q9H4P4 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF41Q9H4P4 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
RNF41Q9H4P4 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC17.69■□□□□ 0.42
RNF41Q9H4P4 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17.69■□□□□ 0.42
RNF41Q9H4P4 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF41Q9H4P4 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF41Q9H4P4 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF41Q9H4P4 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF41Q9H4P4 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF41Q9H4P4 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF41Q9H4P4 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF41Q9H4P4 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RNF41Q9H4P4 MYO15B-237ENST00000642007 4893 ntBASIC17.69■□□□□ 0.42
RNF41Q9H4P4 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF41Q9H4P4 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF41Q9H4P4 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RNF41Q9H4P4 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
RNF41Q9H4P4 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF41Q9H4P4 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF41Q9H4P4 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF41Q9H4P4 AL136309.1-201ENST00000403917 691 ntBASIC17.69■□□□□ 0.42
RNF41Q9H4P4 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.69■□□□□ 0.42
RNF41Q9H4P4 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.69■□□□□ 0.42
RNF41Q9H4P4 HOMER2P2-201ENST00000451621 847 ntBASIC17.69■□□□□ 0.42
RNF41Q9H4P4 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF41Q9H4P4 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF41Q9H4P4 AC131206.1-201ENST00000538078 1211 ntBASIC17.69■□□□□ 0.42
RNF41Q9H4P4 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.69■□□□□ 0.42
RNF41Q9H4P4 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF41Q9H4P4 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF41Q9H4P4 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RNF41Q9H4P4 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF41Q9H4P4 API5-203ENST00000455725 2257 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF41Q9H4P4 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF41Q9H4P4 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF41Q9H4P4 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC17.69■□□□□ 0.42
RNF41Q9H4P4 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF41Q9H4P4 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF41Q9H4P4 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF41Q9H4P4 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF41Q9H4P4 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RNF41Q9H4P4 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF41Q9H4P4 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.68■□□□□ 0.42
RNF41Q9H4P4 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RNF41Q9H4P4 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF41Q9H4P4 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF41Q9H4P4 TNRC18P2-201ENST00000417666 2714 ntBASIC17.68■□□□□ 0.42
RNF41Q9H4P4 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF41Q9H4P4 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF41Q9H4P4 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RNF41Q9H4P4 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF41Q9H4P4 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.68■□□□□ 0.42
RNF41Q9H4P4 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF41Q9H4P4 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF41Q9H4P4 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
RNF41Q9H4P4 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF41Q9H4P4 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF41Q9H4P4 RGS5-214ENST00000429865 754 ntTSL 3 BASIC17.68■□□□□ 0.42
RNF41Q9H4P4 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.68■□□□□ 0.42
RNF41Q9H4P4 AL355994.2-201ENST00000447882 704 ntBASIC17.68■□□□□ 0.42
RNF41Q9H4P4 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF41Q9H4P4 BNIP3P42-201ENST00000454982 569 ntBASIC17.68■□□□□ 0.42
RNF41Q9H4P4 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF41Q9H4P4 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF41Q9H4P4 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC17.68■□□□□ 0.42
RNF41Q9H4P4 BNIP3P29-201ENST00000598302 571 ntBASIC17.68■□□□□ 0.42
RNF41Q9H4P4 AC011447.5-201ENST00000616168 564 ntBASIC17.68■□□□□ 0.42
RNF41Q9H4P4 MIR6752-201ENST00000618442 71 ntBASIC17.68■□□□□ 0.42
RNF41Q9H4P4 INE2-201ENST00000630399 1874 ntBASIC17.68■□□□□ 0.42
RNF41Q9H4P4 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF41Q9H4P4 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF41Q9H4P4 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC17.68■□□□□ 0.42
RNF41Q9H4P4 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF41Q9H4P4 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RNF41Q9H4P4 CICP23-201ENST00000605013 2741 ntBASIC17.68■□□□□ 0.42
RNF41Q9H4P4 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
RNF41Q9H4P4 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RNF41Q9H4P4 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF41Q9H4P4 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF41Q9H4P4 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF41Q9H4P4 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF41Q9H4P4 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC17.67■□□□□ 0.42
RNF41Q9H4P4 AC020910.5-201ENST00000623668 1865 ntBASIC17.67■□□□□ 0.42
RNF41Q9H4P4 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF41Q9H4P4 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF41Q9H4P4 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF41Q9H4P4 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF41Q9H4P4 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms