Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 PPIL2-201ENST00000335025 4929 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 RPS6KA2-211ENST00000510118 5992 ntTSL 2 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 MTHFR-202ENST00000376583 7044 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 KCNAB2-202ENST00000341524 4207 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 CEP68-201ENST00000260569 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 SLC35B4-201ENST00000378509 6797 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 ERCC6L2-201ENST00000288985 4564 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 ZNF773-205ENST00000599847 5832 ntTSL 2 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 SLC35F1-201ENST00000360388 4852 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 LSS-211ENST00000522411 2523 ntTSL 2 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 AMBRA1-212ENST00000534300 5067 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 FXN-203ENST00000396366 922 ntTSL 2 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 MRPL20P1-201ENST00000400819 433 ntBASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 ELK2BP-201ENST00000415014 1224 ntBASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 ATP6V0CP3-201ENST00000417255 467 ntBASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 LAGE3P1-201ENST00000425356 484 ntBASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 FAM185BP-201ENST00000443595 716 ntBASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 KRT18P57-201ENST00000443599 1254 ntBASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 TPT1P11-201ENST00000458482 498 ntBASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 TSPAN5-202ENST00000505184 1191 ntTSL 2 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 CCDC74BP1-201ENST00000508880 1123 ntBASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 FICD-205ENST00000552758 603 ntTSL 2 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 AC079414.2-201ENST00000567157 1104 ntBASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 AC079791.1-201ENST00000605356 973 ntBASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 AC008667.4-201ENST00000607370 168 ntBASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 AL078644.1-201ENST00000609881 752 ntBASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 AC133561.5-201ENST00000635547 218 ntBASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 HERC2P9-206ENST00000529624 5187 ntBASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 RPS6KC1-209ENST00000615329 4022 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 MYH11-202ENST00000396324 6847 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 155.3 ms