Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
SLF1Q9BQI6 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLF1Q9BQI6 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.47■□□□□ 0.39
SLF1Q9BQI6 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLF1Q9BQI6 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SLF1Q9BQI6 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.47■□□□□ 0.39
SLF1Q9BQI6 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLF1Q9BQI6 PKD1P5-201ENST00000532415 10291 ntBASIC17.47■□□□□ 0.39
SLF1Q9BQI6 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLF1Q9BQI6 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.47■□□□□ 0.39
SLF1Q9BQI6 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLF1Q9BQI6 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLF1Q9BQI6 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLF1Q9BQI6 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLF1Q9BQI6 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SLF1Q9BQI6 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLF1Q9BQI6 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLF1Q9BQI6 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SLF1Q9BQI6 HNRNPA1P63-201ENST00000427917 963 ntBASIC17.47■□□□□ 0.39
SLF1Q9BQI6 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17.47■□□□□ 0.39
SLF1Q9BQI6 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
SLF1Q9BQI6 AKR7A2P1-201ENST00000460134 915 ntBASIC17.47■□□□□ 0.39
SLF1Q9BQI6 ATP6V0CP2-201ENST00000469409 207 ntBASIC17.47■□□□□ 0.39
SLF1Q9BQI6 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.47■□□□□ 0.39
SLF1Q9BQI6 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC17.47■□□□□ 0.39
SLF1Q9BQI6 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC17.47■□□□□ 0.39
SLF1Q9BQI6 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC17.47■□□□□ 0.39
SLF1Q9BQI6 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC17.47■□□□□ 0.39
SLF1Q9BQI6 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC17.47■□□□□ 0.39
SLF1Q9BQI6 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
SLF1Q9BQI6 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLF1Q9BQI6 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC17.47■□□□□ 0.39
SLF1Q9BQI6 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
SLF1Q9BQI6 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLF1Q9BQI6 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLF1Q9BQI6 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLF1Q9BQI6 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLF1Q9BQI6 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC17.47■□□□□ 0.39
SLF1Q9BQI6 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SLF1Q9BQI6 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLF1Q9BQI6 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.47■□□□□ 0.39
SLF1Q9BQI6 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.47■□□□□ 0.39
SLF1Q9BQI6 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.47■□□□□ 0.39
SLF1Q9BQI6 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLF1Q9BQI6 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
SLF1Q9BQI6 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLF1Q9BQI6 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLF1Q9BQI6 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLF1Q9BQI6 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLF1Q9BQI6 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
SLF1Q9BQI6 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLF1Q9BQI6 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLF1Q9BQI6 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLF1Q9BQI6 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLF1Q9BQI6 AC138028.6-201ENST00000616106 1482 ntBASIC17.46■□□□□ 0.39
SLF1Q9BQI6 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SLF1Q9BQI6 AL359258.3-201ENST00000622910 2331 ntBASIC17.46■□□□□ 0.39
SLF1Q9BQI6 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLF1Q9BQI6 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLF1Q9BQI6 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SLF1Q9BQI6 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC17.46■□□□□ 0.39
SLF1Q9BQI6 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC17.46■□□□□ 0.39
SLF1Q9BQI6 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.46■□□□□ 0.39
SLF1Q9BQI6 SCARNA20.5-201ENST00000516991 142 ntBASIC17.46■□□□□ 0.39
SLF1Q9BQI6 AC126915.1-201ENST00000522847 1038 ntBASIC17.46■□□□□ 0.39
SLF1Q9BQI6 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC17.46■□□□□ 0.39
SLF1Q9BQI6 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.46■□□□□ 0.39
SLF1Q9BQI6 AC020914.3-201ENST00000594712 304 ntBASIC17.46■□□□□ 0.39
SLF1Q9BQI6 DIO1-215ENST00000610607 796 ntTSL 5 BASIC17.46■□□□□ 0.39
SLF1Q9BQI6 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17.46■□□□□ 0.39
SLF1Q9BQI6 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC17.46■□□□□ 0.39
SLF1Q9BQI6 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLF1Q9BQI6 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SLF1Q9BQI6 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SLF1Q9BQI6 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SLF1Q9BQI6 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLF1Q9BQI6 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLF1Q9BQI6 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.46■□□□□ 0.39
SLF1Q9BQI6 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLF1Q9BQI6 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
SLF1Q9BQI6 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SLF1Q9BQI6 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLF1Q9BQI6 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SLF1Q9BQI6 AP000593.2-201ENST00000542775 1433 ntBASIC17.46■□□□□ 0.39
SLF1Q9BQI6 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
SLF1Q9BQI6 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SLF1Q9BQI6 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SLF1Q9BQI6 AC067930.6-201ENST00000623257 4947 ntBASIC17.45■□□□□ 0.38
SLF1Q9BQI6 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
SLF1Q9BQI6 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SLF1Q9BQI6 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.45■□□□□ 0.38
SLF1Q9BQI6 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC17.45■□□□□ 0.38
SLF1Q9BQI6 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLF1Q9BQI6 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SLF1Q9BQI6 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC17.45■□□□□ 0.38
SLF1Q9BQI6 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC17.45■□□□□ 0.38
SLF1Q9BQI6 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLF1Q9BQI6 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SLF1Q9BQI6 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLF1Q9BQI6 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms