Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CCL13Q99616 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL13Q99616 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL13Q99616 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
CCL13Q99616 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
CCL13Q99616 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL13Q99616 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCL13Q99616 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC12.63□□□□□ -0.39
CCL13Q99616 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL13Q99616 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CCL13Q99616 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL13Q99616 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC12.63□□□□□ -0.39
CCL13Q99616 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.63□□□□□ -0.39
CCL13Q99616 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCL13Q99616 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCL13Q99616 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL13Q99616 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL13Q99616 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
CCL13Q99616 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCL13Q99616 AC016694.1-201ENST00000434179 700 ntBASIC12.63□□□□□ -0.39
CCL13Q99616 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
CCL13Q99616 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCL13Q99616 AC007551.1-201ENST00000457394 519 ntBASIC12.63□□□□□ -0.39
CCL13Q99616 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
CCL13Q99616 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
CCL13Q99616 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CCL13Q99616 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC12.63□□□□□ -0.39
CCL13Q99616 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC12.63□□□□□ -0.39
CCL13Q99616 APRT-204ENST00000563655 709 ntTSL 5 BASIC12.63□□□□□ -0.39
CCL13Q99616 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC12.63□□□□□ -0.39
CCL13Q99616 APOC4-201ENST00000591600 348 ntTSL 3 BASIC12.63□□□□□ -0.39
CCL13Q99616 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.63□□□□□ -0.39
CCL13Q99616 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL13Q99616 AC239800.4-201ENST00000603712 296 ntBASIC12.63□□□□□ -0.39
CCL13Q99616 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC12.63□□□□□ -0.39
CCL13Q99616 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL13Q99616 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.63□□□□□ -0.39
CCL13Q99616 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL13Q99616 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL13Q99616 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC12.63□□□□□ -0.39
CCL13Q99616 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL13Q99616 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
CCL13Q99616 GPI-205ENST00000586425 1799 ntTSL 5 BASIC12.63□□□□□ -0.39
CCL13Q99616 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL13Q99616 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL13Q99616 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL13Q99616 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL13Q99616 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL13Q99616 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL13Q99616 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CCL13Q99616 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL13Q99616 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL13Q99616 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCL13Q99616 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL13Q99616 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL13Q99616 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL13Q99616 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.62□□□□□ -0.39
CCL13Q99616 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL13Q99616 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCL13Q99616 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL13Q99616 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.62□□□□□ -0.39
CCL13Q99616 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL13Q99616 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL13Q99616 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL13Q99616 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
CCL13Q99616 AC007686.3-201ENST00000619017 3487 ntBASIC12.62□□□□□ -0.39
CCL13Q99616 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL13Q99616 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL13Q99616 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CCL13Q99616 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL13Q99616 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL13Q99616 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.62□□□□□ -0.39
CCL13Q99616 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
CCL13Q99616 AL138709.1-201ENST00000614840 1693 ntBASIC12.62□□□□□ -0.39
CCL13Q99616 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL13Q99616 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL13Q99616 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL13Q99616 LBX2-201ENST00000341396 886 ntTSL 3 BASIC12.62□□□□□ -0.39
CCL13Q99616 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CCL13Q99616 HIST1H2BPS3-201ENST00000419683 341 ntBASIC12.62□□□□□ -0.39
CCL13Q99616 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL13Q99616 AC112492.5-201ENST00000421897 457 ntBASIC12.62□□□□□ -0.39
CCL13Q99616 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.62□□□□□ -0.39
CCL13Q99616 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL13Q99616 U91328.1-201ENST00000437528 223 ntBASIC12.62□□□□□ -0.39
CCL13Q99616 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.62□□□□□ -0.39
CCL13Q99616 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
CCL13Q99616 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC12.62□□□□□ -0.39
CCL13Q99616 FO681548.1-201ENST00000455617 1132 ntBASIC12.62□□□□□ -0.39
CCL13Q99616 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC12.62□□□□□ -0.39
CCL13Q99616 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC12.62□□□□□ -0.39
CCL13Q99616 RAB43P1-201ENST00000561790 589 ntBASIC12.62□□□□□ -0.39
CCL13Q99616 AC025279.2-201ENST00000569730 653 ntBASIC12.62□□□□□ -0.39
CCL13Q99616 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC12.62□□□□□ -0.39
CCL13Q99616 GNRHR2-203ENST00000581100 1187 ntBASIC12.62□□□□□ -0.39
CCL13Q99616 AC244669.2-201ENST00000612320 853 ntBASIC12.62□□□□□ -0.39
CCL13Q99616 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL13Q99616 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
CCL13Q99616 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CCL13Q99616 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms