Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC006116.2-201ENST00000589958 988 ntBASIC12.5□□□□□ -0.41
CSMD1Q96PZ7 AC009145.4-201ENST00000625119 1294 ntBASIC12.5□□□□□ -0.41
CSMD1Q96PZ7 AC092299.1-201ENST00000632679 757 ntBASIC12.5□□□□□ -0.41
CSMD1Q96PZ7 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CSMD1Q96PZ7 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CSMD1Q96PZ7 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CSMD1Q96PZ7 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
CSMD1Q96PZ7 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CSMD1Q96PZ7 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CSMD1Q96PZ7 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 PHB-210ENST00000511832 1509 ntTSL 2 BASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 USB1-205ENST00000561743 1135 ntTSL 3 BASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 AC100827.2-201ENST00000563214 1194 ntBASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 BAX-205ENST00000391871 687 ntTSL 5 BASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 RN7SL173P-201ENST00000461853 292 ntBASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 SIGLEC20P-201ENST00000595243 1311 ntBASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 AC013268.4-201ENST00000637413 2228 ntBASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 AL929302.1-201ENST00000426556 871 ntBASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 AC007656.1-201ENST00000552238 573 ntTSL 4 BASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 AC023824.1-201ENST00000562945 2975 ntBASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 AC020931.1-201ENST00000589622 1346 ntBASIC12.49□□□□□ -0.41
CSMD1Q96PZ7 API5-208ENST00000531273 1868 ntTSL 2 BASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 MAGEA7P-201ENST00000436482 942 ntBASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 RPL35P9-201ENST00000446059 350 ntBASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 AC002472.3-201ENST00000640124 621 ntBASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 MARK2P16-201ENST00000605714 1723 ntBASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 ACE-203ENST00000413513 2237 ntTSL 2 BASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 RN7SKP230-201ENST00000365642 335 ntBASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 MIR1301-201ENST00000408518 82 ntBASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms